Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 TOMM20P4-201ENST00000427861 435 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AL359273.1-201ENST00000510918 627 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 RNU5F-8P-201ENST00000515941 111 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 RNU6-1069P-201ENST00000516612 133 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 RNU6-677P-201ENST00000516914 101 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC144568.1-201ENST00000520139 137 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC026371.1-201ENST00000551867 419 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC090115.3-201ENST00000553218 849 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC004832.5-201ENST00000608677 401 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AL590808.1-201ENST00000618696 141 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC005332.5-201ENST00000591222 2919 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 SMIM11P1-201ENST00000369586 178 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 SNORD116-18-201ENST00000383961 92 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 RNU6-214P-201ENST00000384130 107 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 RNU6-708P-201ENST00000384217 107 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 RPL19P1-201ENST00000411635 428 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC010631.1-201ENST00000474150 156 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 CYCTP-201ENST00000504253 315 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 SEPT14P8-201ENST00000508026 178 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 RNU7-4P-201ENST00000516961 62 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC009127.3-201ENST00000570531 403 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 AC108706.1-201ENST00000611053 297 ntBASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
COL17A1Q9UMD9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 AC090971.4-201ENST00000560291 1800 ntBASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 RNU6-1035P-201ENST00000384477 107 ntBASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 AC099677.1-201ENST00000420575 175 ntBASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 RPS23P5-201ENST00000495419 428 ntBASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 AC096745.1-201ENST00000509945 370 ntBASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.8□□□□□ -1.64
COL17A1Q9UMD9 AC000123.3-201ENST00000624029 4975 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 AC000403.1-201ENST00000613696 3585 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 Y_RNA.488-201ENST00000384403 102 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 MIR764-201ENST00000390811 85 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 SNORD115-46-201ENST00000390982 71 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 RNA5SP508-201ENST00000411327 119 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 AC022018.1-201ENST00000430685 241 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 RPL23AP33-201ENST00000442301 452 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 RPL23AP31-201ENST00000456160 467 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 RNU6-953P-201ENST00000459154 107 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 HMGB1P25-201ENST00000468402 607 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 AC087884.1-201ENST00000469738 328 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 RNA5SP272-201ENST00000516095 111 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 RNU6-323P-201ENST00000521915 107 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 RPL23AP84-201ENST00000571193 464 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 LINC00901.1-201ENST00000617252 152 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 MIR622-201ENST00000638396 96 ntBASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL17A1Q9UMD9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 Y_RNA.541-201ENST00000384640 113 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 RNA5SP56-201ENST00000410277 118 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 RPL37P6-201ENST00000460682 294 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 AC117503.1-201ENST00000472241 394 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 SNORD116-28-201ENST00000516123 91 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 AC025423.5-201ENST00000550230 219 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms