Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AP006437.1-201ENST00000641440 3685 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 RNU6-562P-201ENST00000362731 107 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 RNU6-72P-201ENST00000384285 79 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 SNORD73A-201ENST00000386062 65 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 RPL21P3-201ENST00000395517 478 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AL512633.1-201ENST00000399931 655 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 RNA5SP21-201ENST00000410917 96 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AC016831.2-201ENST00000417179 352 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 BPY2DP-201ENST00000422208 265 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AL590632.1-201ENST00000424289 371 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 IFNA11P-201ENST00000446352 526 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 UQCRHP3-201ENST00000451503 251 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AC146507.2-201ENST00000460608 476 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 RNA5SP380-201ENST00000517190 98 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 DEFB122-202ENST00000569013 197 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AL355375.2-201ENST00000574825 175 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 MIR4790-201ENST00000577799 79 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 MIR4795-201ENST00000584182 89 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 OR1M4P-201ENST00000589199 287 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 ELOCP5-201ENST00000604924 333 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 AC138627.2-201ENST00000624202 601 ntBASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HDAC9Q9UKV0 RNU6-37P-201ENST00000362692 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNA5SP68-201ENST00000363885 119 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-11P-201ENST00000364234 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-25P-201ENST00000383873 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-1-201ENST00000383898 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-48P-201ENST00000384161 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-36P-201ENST00000384172 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-4P-201ENST00000384205 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-5P-201ENST00000384238 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-3P-201ENST00000384314 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-16P-201ENST00000384385 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-15P-201ENST00000384534 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-2-201ENST00000384627 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-29P-201ENST00000384637 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-9-201ENST00000384776 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-33P-201ENST00000384793 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 AL513475.1-201ENST00000406602 315 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RN7SKP158-201ENST00000410453 326 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 SNORD56-201ENST00000413522 71 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RPS3AP52-201ENST00000435639 297 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RN7SL75P-201ENST00000461926 281 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 AC108210.2-201ENST00000503681 201 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 AC015712.3-201ENST00000559380 164 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 LINC00933-203ENST00000559812 219 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 RNU6-6P-201ENST00000606623 107 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 MIR6134-201ENST00000617606 109 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 MTND4P29-201ENST00000503122 1372 ntBASIC3.36□□□□□ -1.87
HDAC9Q9UKV0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 RNU1-112P-201ENST00000364401 164 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 RNU6-898P-201ENST00000365627 104 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 RNU6-214P-201ENST00000384130 107 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 RNU6-95P-201ENST00000384697 107 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 MIR627-201ENST00000384979 97 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 RNU4-14P-201ENST00000410858 122 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 SNAP23P1-201ENST00000433229 246 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 RPS15AP5-201ENST00000436276 388 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 UBBP3-201ENST00000445497 241 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 RPL23AP45-201ENST00000476406 468 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC026371.1-201ENST00000551867 419 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC007151.1-201ENST00000572774 483 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AL355877.2-201ENST00000603670 358 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC064836.2-201ENST00000609491 462 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 MIR6817-201ENST00000615588 66 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 AC110491.1-201ENST00000562191 2010 ntBASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC9Q9UKV0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms