Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RPL23AP36-201ENST00000413895 458 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AC079780.1-201ENST00000428259 207 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 RPL21P40-201ENST00000428586 483 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AL162725.1-201ENST00000435405 301 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 HMGN2P7-201ENST00000456186 273 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 HSPE1P6-201ENST00000479457 291 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 RNA5SP164-201ENST00000516533 110 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 SCARNA14-201ENST00000516903 136 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 RNU6-1231P-201ENST00000517185 103 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 RNU4-60P-201ENST00000517239 135 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AC104581.2-201ENST00000572227 430 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 MIR3922-201ENST00000585192 84 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AC008121.1-201ENST00000603244 268 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AL161798.1-201ENST00000604630 131 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AC005520.5-201ENST00000613926 164 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AL161629.2-201ENST00000615347 275 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AL360181.4-201ENST00000621752 134 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 AL353748.2-201ENST00000622148 471 ntBASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
LMCD1Q9NZU5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 RBBP8P1-201ENST00000449447 1844 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 MIR412-201ENST00000362142 91 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 SNORD35B-201ENST00000363660 87 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 RNU6-1074P-201ENST00000383995 104 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 Y_RNA.441-201ENST00000384123 112 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 TOMM20P4-201ENST00000427861 435 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 AC008267.6-201ENST00000441664 139 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 RN7SL330P-201ENST00000469709 307 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 RN7SL601P-201ENST00000471221 293 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 AC108145.1-201ENST00000503770 153 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 RNU2-31P-201ENST00000516954 155 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 RN7SKP57-201ENST00000517248 293 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 AC112693.2-201ENST00000556538 232 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 AC022968.1-201ENST00000567372 442 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 RPL23AP78-201ENST00000599928 470 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 AC007785.2-201ENST00000598627 1916 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 OR4G2P-202ENST00000641004 1759 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 AC009812.4-201ENST00000569134 1805 ntBASIC4.16□□□□□ -1.74
LMCD1Q9NZU5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMCD1Q9NZU5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
LMCD1Q9NZU5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMCD1Q9NZU5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
LMCD1Q9NZU5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RNU1-15P-201ENST00000353977 144 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.44-201ENST00000362676 108 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.292-201ENST00000364904 97 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RNU6-290P-201ENST00000365212 101 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 MIR10A-201ENST00000385043 110 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RNU5E-9P-201ENST00000411164 104 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 HMGB3P8-201ENST00000449709 577 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 SSXP4-201ENST00000451349 245 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 HSPE1P25-201ENST00000455484 251 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 SNORD105B-201ENST00000458770 79 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 AC091179.1-201ENST00000461606 579 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RPS29P27-201ENST00000463711 170 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RN7SL807P-201ENST00000470923 297 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 ANXA2P1-201ENST00000505539 926 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RNU6-1219P-201ENST00000516143 112 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RNU6-1012P-201ENST00000516606 109 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RNA5SP170-201ENST00000517150 101 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 AC109479.2-201ENST00000517842 174 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 AL121603.1-201ENST00000553815 142 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 AC097372.5-201ENST00000623665 376 ntBASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMCD1Q9NZU5 USP8P1-201ENST00000494673 3183 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 SNORD14B-201ENST00000364533 90 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 RNU6-1325P-201ENST00000364905 105 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.343-201ENST00000365354 112 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.580-201ENST00000391004 95 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 SNORD78.2-201ENST00000391076 69 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 RNU6-651P-201ENST00000411040 105 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 Z82188.1-201ENST00000436709 154 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 AC084851.1-201ENST00000529105 249 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 SNORD84-203ENST00000584275 78 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms