Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 MTCO3P40-201ENST00000392516 676 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AC068050.1-201ENST00000394891 380 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AL162578.1-201ENST00000406202 378 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 RNA5SP21-201ENST00000410917 96 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AL590556.1-201ENST00000423231 483 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 FDX1P2-201ENST00000450769 375 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 RNU7-138P-201ENST00000459479 64 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AC068781.1-201ENST00000488231 618 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 RNU4-29P-201ENST00000515943 174 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 MIR3136-201ENST00000583498 78 ntBASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.31□□□□□ -2.04
CHCHD3Q9NX63 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 RNU6-623P-201ENST00000363143 105 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 SNORA25B-201ENST00000365507 128 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 SNORD37.1-201ENST00000390968 65 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 RPL17P50-201ENST00000396131 546 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 EEF1A1P41-201ENST00000414667 207 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 RPL32P28-201ENST00000443577 397 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 HIGD1AP13-201ENST00000509878 289 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AC034114.1-201ENST00000520293 285 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 NDUFA5P6-201ENST00000542110 379 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 OR11H5P-201ENST00000554039 926 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AC026271.5-201ENST00000577873 130 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 LARP7P3-201ENST00000579888 337 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AC007229.1-201ENST00000590455 412 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 AL627230.6-201ENST00000611129 280 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 HULC.1-201ENST00000612720 240 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.3□□□□□ -2.04
CHCHD3Q9NX63 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 Y_RNA.40-201ENST00000362645 93 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 RNU1-91P-201ENST00000364746 163 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 MIR544A-201ENST00000384855 91 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 AL030996.1-201ENST00000411430 235 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 CBX3P6-201ENST00000430257 527 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 USP9YP14-201ENST00000430663 563 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 RPL7P54-201ENST00000438336 674 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 RPL30P12-201ENST00000474666 353 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 RNU6-189P-201ENST00000516120 101 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 CENPUP1-201ENST00000526649 1202 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 AC103987.3-201ENST00000582071 292 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 MIR7106-201ENST00000612419 65 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 AC103705.1-201ENST00000619013 241 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 AC090517.3-201ENST00000625170 141 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 SCARNA15.3-201ENST00000626315 122 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 SCARNA4.1-201ENST00000628597 123 ntBASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.29□□□□□ -2.04
CHCHD3Q9NX63 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 RNU6-1285P-201ENST00000363480 105 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 RNU6-336P-201ENST00000364891 107 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AL356057.3-201ENST00000402607 340 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 EDDM3CP-201ENST00000415977 425 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AL139413.1-201ENST00000421309 217 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC087499.2-201ENST00000432861 149 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC107083.1-201ENST00000439643 279 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC243964.1-201ENST00000441814 261 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 RPL9P6-201ENST00000492764 598 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 SNORA14.1-201ENST00000516113 141 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 Y_RNA.693-201ENST00000516641 110 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AP000763.2-201ENST00000540641 163 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC078814.3-201ENST00000553036 491 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 SNRPGP17-201ENST00000603780 214 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC018889.1-201ENST00000605372 397 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC123912.5-201ENST00000605470 343 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 AC087241.4-201ENST00000612441 480 ntBASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.28□□□□□ -2.04
CHCHD3Q9NX63 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHCHD3Q9NX63 RNU4-56P-201ENST00000364700 142 ntBASIC2.27□□□□□ -2.05
CHCHD3Q9NX63 SNORA69-201ENST00000383895 132 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms