Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNU6-407P-201ENST00000365280 104 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 SNORD6-201ENST00000365444 73 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 Y_RNA.525-201ENST00000384570 113 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 AL355497.1-201ENST00000406262 551 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 BX510359.2-201ENST00000417920 305 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 GPM6BP3-201ENST00000442797 145 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 RN7SL176P-201ENST00000580352 264 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 AL356218.2-201ENST00000605264 187 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 AL391261.4-201ENST00000616012 481 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 AC068647.2-201ENST00000637380 353 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 AL136164.3-201ENST00000624429 3978 ntBASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 Y_RNA.287-201ENST00000364853 94 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 RNU6-217P-201ENST00000384164 104 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 RNU6-793P-201ENST00000384233 104 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 RN7SKP61-201ENST00000410642 295 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 AL160275.2-201ENST00000412010 394 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 AL121914.1-201ENST00000450188 156 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 RPL23AP62-201ENST00000463396 453 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 RNU6-1007P-201ENST00000516586 107 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 RNU6-928P-201ENST00000516876 104 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 MIR4715-201ENST00000584117 79 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 FTX_3.1-201ENST00000610451 147 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 MIR3674-201ENST00000636576 68 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 AL773545.4-201ENST00000637262 310 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 U6.99-201ENST00000637524 83 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 AL513478.4-201ENST00000641636 310 ntBASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CUEDC1Q9NWM3 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AC010300.1-201ENST00000600671 5134 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AC118273.1-201ENST00000525324 3006 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-942P-201ENST00000363002 107 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 SNORA25.7-201ENST00000364375 127 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-1141P-201ENST00000364520 107 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 Y_RNA.251-201ENST00000364551 99 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-245P-201ENST00000384020 107 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 MIR23B-201ENST00000384832 97 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AL512633.1-201ENST00000399931 655 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AL592291.1-201ENST00000403830 352 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 HMGN2P30-201ENST00000423237 256 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AC016831.4-201ENST00000438302 307 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 RPL7AP28-201ENST00000464513 571 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 RPL32P34-201ENST00000486380 400 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 UBE2CP3-201ENST00000502715 450 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-436P-201ENST00000516171 114 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AC021231.3-201ENST00000558497 370 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 MIR3121-201ENST00000579680 77 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AL391813.1-201ENST00000603098 260 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 AC073073.2-201ENST00000609827 2578 ntBASIC4.52□□□□□ -1.69
CUEDC1Q9NWM3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 RNU1-94P-201ENST00000362627 173 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 Y_RNA.293-201ENST00000364908 93 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 U8.7-201ENST00000364940 136 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 Y_RNA.393-201ENST00000383936 102 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 MIR526A2-201ENST00000390198 65 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 MIR888-201ENST00000401186 77 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 RNA5SP475-201ENST00000410568 110 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 RN7SKP284-201ENST00000411002 343 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms