Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6-1179P-201ENST00000384667 107 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 U3.19-201ENST00000390893 196 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 RN7SKP111-201ENST00000410349 271 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 RNU2-51P-201ENST00000410708 197 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 RNU6-394P-201ENST00000410735 107 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 MRPL42P6-201ENST00000486397 371 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 BTF3L4P4-201ENST00000506381 449 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 SEPT14P8-201ENST00000508026 178 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 AC008489.1-201ENST00000524271 483 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 AC009318.2-201ENST00000610917 651 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 MIR486-1-201ENST00000612171 68 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 AC240442.1-201ENST00000616055 283 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 SCARNA15.3-201ENST00000626315 122 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 SCARNA4.1-201ENST00000628597 123 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 AC007785.2-201ENST00000598627 1916 ntBASIC4.5□□□□□ -1.69
ATG3Q9NT62 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG3Q9NT62 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 TNPO1P3-201ENST00000436471 2662 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG3Q9NT62 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG3Q9NT62 RNU6-1020P-201ENST00000363684 107 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 RNY3P4-201ENST00000384428 101 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 RNU6-1117P-201ENST00000384525 104 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATG3Q9NT62 HMGN2P8-201ENST00000391458 268 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 MIR190B-201ENST00000401119 79 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 MTCYBP2-201ENST00000407745 171 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 U3.39-201ENST00000408569 239 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG3Q9NT62 VDAC1P3-201ENST00000434069 851 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG3Q9NT62 AC079354.2-201ENST00000453523 154 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG3Q9NT62 Y_RNA.662-201ENST00000516028 97 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 MRPS18CP4-201ENST00000535821 231 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG3Q9NT62 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.49□□□□□ -1.69
ATG3Q9NT62 MIR3690-201ENST00000580266 75 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 MIR4325-201ENST00000583049 90 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 AC009314.1-201ENST00000603871 304 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 BRDTP1-201ENST00000605735 677 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 AC011476.5-201ENST00000615594 130 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 RMST_4.1-201ENST00000616886 107 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 U7.8-201ENST00000619968 63 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 U6.106-201ENST00000636360 105 ntBASIC4.49□□□□□ -1.69
ATG3Q9NT62 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG3Q9NT62 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ATG3Q9NT62 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG3Q9NT62 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATG3Q9NT62 BX322639.1-202ENST00000423987 2213 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG3Q9NT62 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG3Q9NT62 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG3Q9NT62 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG3Q9NT62 Y_RNA.44-201ENST00000362676 108 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-37P-201ENST00000362692 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-11P-201ENST00000364234 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-7-201ENST00000364784 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 Y_RNA.292-201ENST00000364904 97 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-8-201ENST00000365467 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-25P-201ENST00000383873 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-1-201ENST00000383898 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-36P-201ENST00000384172 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-4P-201ENST00000384205 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-5P-201ENST00000384238 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-3P-201ENST00000384314 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-16P-201ENST00000384385 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-15P-201ENST00000384534 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-2-201ENST00000384627 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-29P-201ENST00000384637 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-9-201ENST00000384776 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG3Q9NT62 snoU13.4-201ENST00000458916 104 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG3Q9NT62 AL590705.4-201ENST00000532209 134 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNU6-6P-201ENST00000606623 107 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 MIR8076-201ENST00000611401 83 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 AL360181.4-201ENST00000621752 134 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG3Q9NT62 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG3Q9NT62 OTUD4P1-201ENST00000237841 3067 ntBASIC4.48□□□□□ -1.69
ATG3Q9NT62 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG3Q9NT62 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG3Q9NT62 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
ATG3Q9NT62 U3.6-201ENST00000363622 211 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 Y_RNA.240-201ENST00000364469 95 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 RNU6-290P-201ENST00000365212 101 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 RNU6-827P-201ENST00000365553 106 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 Y_RNA.405-201ENST00000383979 100 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms