Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 MRPL50P4-201ENST00000446432 475 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AMD1P1-201ENST00000457220 922 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC096745.1-201ENST00000509945 370 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC091826.1-201ENST00000514065 313 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-1088P-201ENST00000516850 104 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 SCARNA3-201ENST00000517097 143 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC103810.1-201ENST00000579873 453 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 MIR3199-1-201ENST00000582434 88 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 MIR3616-201ENST00000584070 92 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC023043.3-201ENST00000593113 385 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AL162274.2-201ENST00000614406 332 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC022306.2-201ENST00000617563 647 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC241585.2-209ENST00000638217 143 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC080128.1-201ENST00000474389 1917 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SLC6A13Q9NSD5 AC002543.1-201ENST00000299783 1954 ntBASIC2.65□□□□□ -1.98
SLC6A13Q9NSD5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 Y_RNA.301-201ENST00000364990 103 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 RN7SKP32-201ENST00000410167 303 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 BX276092.3-201ENST00000424182 230 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 PPP1R2P5-201ENST00000457256 603 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 SNORA59A-201ENST00000459326 152 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 RPS29P26-201ENST00000477483 171 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 RPL23AP70-201ENST00000483361 460 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 MTCO1P29-201ENST00000496868 288 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-273P-201ENST00000516937 96 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 AC026464.5-201ENST00000562497 722 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 AC138761.3-201ENST00000579993 334 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 AC135507.2-201ENST00000612443 309 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 AC007792.1-201ENST00000623023 402 ntBASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SLC6A13Q9NSD5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 OR56A5-201ENST00000340110 738 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 RNU1-57P-201ENST00000384491 166 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-692P-201ENST00000384496 107 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-1222P-201ENST00000384615 107 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-95P-201ENST00000384697 107 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 MIR544A-201ENST00000384855 91 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AL360182.1-201ENST00000397433 468 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AL030996.1-201ENST00000411430 235 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 RPL30P4-201ENST00000429309 333 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 GSTA11P-201ENST00000452866 669 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 U8.21-201ENST00000459536 136 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AP001486.1-201ENST00000463339 476 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AC130509.1-201ENST00000464158 433 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AC096576.1-201ENST00000489014 359 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 SNORA25.11-201ENST00000515935 105 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 RNA5SP341-201ENST00000516261 117 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-566P-201ENST00000516790 107 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 HPRT1P3-201ENST00000539521 576 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 MIR548S-201ENST00000581352 82 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AC073410.2-201ENST00000603240 332 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
SLC6A13Q9NSD5 AL365361.1-201ENST00000566942 3481 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 SNORA72.1-201ENST00000363485 129 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 Y_RNA.303-201ENST00000364998 94 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 UBA52P6-201ENST00000399822 382 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 U6atac.2-201ENST00000408644 118 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 RNU6-325P-201ENST00000411132 105 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 CYCSP48-201ENST00000417124 323 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AL590632.1-201ENST00000424289 371 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 RPL39P29-201ENST00000447779 157 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 RPL9P9-202ENST00000466501 579 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 RPL30P12-201ENST00000474666 353 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AL049873.1-201ENST00000480540 376 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 RPL39P5-202ENST00000512505 151 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 SMURF2P1-201ENST00000514992 481 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 RNA5SP454-201ENST00000517231 127 ntBASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC6A13Q9NSD5 AP005639.2-201ENST00000527592 928 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms