Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC084357.1-201ENST00000473404 255 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC087190.1-201ENST00000484462 480 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC107032.1-201ENST00000485945 480 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC132942.1-201ENST00000486753 483 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC093591.1-201ENST00000491435 481 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RPL21P16-201ENST00000495531 483 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC090281.1-201ENST00000523019 276 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AL442163.3-201ENST00000554110 156 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 MIR5680-201ENST00000577577 84 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC004944.1-201ENST00000517807 3059 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 snoU2_19.2-201ENST00000363024 80 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RNU6-283P-201ENST00000364788 107 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RNU6-336P-201ENST00000364891 107 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RNU5E-7P-201ENST00000365290 117 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RNU6-741P-201ENST00000383889 107 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.539-201ENST00000384635 107 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RNU6-1197P-201ENST00000391183 107 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RNU2-68P-201ENST00000410878 191 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RPL30P5-201ENST00000494923 336 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RN7SKP40-201ENST00000517211 242 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RRN3P3-201ENST00000549207 578 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 AC104581.2-201ENST00000572227 430 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 AL451007.1-201ENST00000595491 289 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 AC002076.2-201ENST00000617362 122 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 U6.92-201ENST00000636464 89 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 U4.7-201ENST00000638126 106 ntBASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM7Q9NR12 AL035425.3-201ENST00000564206 4996 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AL391987.6-201ENST00000305671 199 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.439-201ENST00000384119 94 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 SNORA1.3-201ENST00000384676 136 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 NDUFB4P6-201ENST00000436819 366 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AL513124.1-201ENST00000450410 614 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AL139109.1-201ENST00000455491 297 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 S100A11P2-201ENST00000467589 312 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 RNU7-175P-201ENST00000515915 61 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.706-201ENST00000516933 99 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.713-201ENST00000517013 96 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AC022080.3-201ENST00000544433 482 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AC093023.1-201ENST00000547375 507 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 U4.6-201ENST00000621618 127 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 AL359693.1-201ENST00000614959 2407 ntBASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM7Q9NR12 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 SNORD115-46-201ENST00000390982 71 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 RPS29P13-201ENST00000402041 169 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 RNU2-14P-201ENST00000411053 191 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 COTL1P1-201ENST00000422309 375 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 PIGPP3-201ENST00000425307 415 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 U8.22-201ENST00000459141 133 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 SNORA70.14-201ENST00000516205 110 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 RNU6-182P-201ENST00000516970 105 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 DEFB108E-201ENST00000524692 240 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 AC136932.1-201ENST00000574771 208 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 MIR5004-201ENST00000579078 107 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 RPL23AP78-201ENST00000599928 470 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 MIR376A1-201ENST00000616574 68 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 MFSD8-233ENST00000641482 4860 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 AC073073.2-201ENST00000609827 2578 ntBASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.91□□□□□ -1.78
PDLIM7Q9NR12 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PDLIM7Q9NR12 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDLIM7Q9NR12 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PDLIM7Q9NR12 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms