Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-1114P-201ENST00000516022 107 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.683-201ENST00000516508 93 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-703P-201ENST00000516946 107 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 RNU2-31P-201ENST00000516954 155 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 AC090877.1-201ENST00000561418 344 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 UBL5P4-201ENST00000562584 236 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 MIR5695-201ENST00000579717 85 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 SNORD113-5-201ENST00000607261 78 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 AC005296.1-201ENST00000616145 209 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-1159P-201ENST00000362933 107 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-942P-201ENST00000363002 107 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.292-201ENST00000364904 97 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-21P-201ENST00000384710 107 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.569-201ENST00000384749 103 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 FTH1P6-201ENST00000430768 320 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AL512844.2-201ENST00000433990 593 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AC098831.1-201ENST00000440661 216 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 TRBV12-2-201ENST00000489763 344 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 Vault.1-201ENST00000516474 102 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 HSPE1P5-201ENST00000561489 272 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AL354798.1-201ENST00000622505 329 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 AC106871.1-201ENST00000568324 3102 ntBASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A2Q9H9S3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 SNORD115-32-201ENST00000364079 82 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RNY4P28-201ENST00000365281 93 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RNU1-64P-201ENST00000365443 163 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-326P-201ENST00000365480 107 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 MIR30B-201ENST00000384850 88 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RNA5SP213-201ENST00000391031 106 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RNU1-139P-201ENST00000391307 165 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RN7SKP51-201ENST00000410781 304 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 CYCSP19-201ENST00000411715 316 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 EIF1AXP1-201ENST00000419267 435 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC092047.1-201ENST00000424997 240 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AL445584.1-201ENST00000431451 330 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RPL23AP14-201ENST00000468281 468 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC109925.1-201ENST00000478069 331 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RN7SL323P-201ENST00000494712 295 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.679-201ENST00000516416 91 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 SCARNA14-201ENST00000516903 136 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC087499.8-201ENST00000578406 226 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 MIR5685-201ENST00000579080 79 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AL162424.1-201ENST00000602325 221 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC037487.3-201ENST00000606668 112 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 AC021753.1-201ENST00000635724 168 ntBASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SEC61A2Q9H9S3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 AL136964.1-201ENST00000622038 2990 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.122-201ENST00000363331 96 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-626P-201ENST00000363354 107 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.418-201ENST00000384029 102 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 MIR199A2-201ENST00000385289 110 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.590-201ENST00000410140 107 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-1001P-201ENST00000411265 100 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms