Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC015540.1-201ENST00000615828 501 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AL031601.2-202ENST00000622650 282 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AC080128.1-201ENST00000474389 1917 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AL109809.4-201ENST00000603520 2185 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 RNU6-393P-201ENST00000384475 107 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 MTND1P1-201ENST00000445453 368 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC083798.1-201ENST00000472671 131 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 RPL21P99-201ENST00000480369 423 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 HMGB1P30-201ENST00000492455 606 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 CCDC34P1-201ENST00000507441 517 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC009646.1-201ENST00000510455 318 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC074344.1-201ENST00000512823 224 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 RNU6-720P-201ENST00000516363 108 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 Y_RNA.687-201ENST00000516558 91 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 CR383656.8-201ENST00000549046 145 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 BNIP3P6-201ENST00000549284 499 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC007375.1-201ENST00000554513 578 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 EIF1P4-201ENST00000572664 335 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AL356280.1-201ENST00000603614 379 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC022418.1-201ENST00000624118 445 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 AC068137.4-201ENST00000638485 296 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.19□□□□□ -2.06
RNF41Q9H4P4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.19□□□□□ -2.06
RNF41Q9H4P4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RNF41Q9H4P4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AL596028.1-201ENST00000326971 197 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 Y_RNA.399-201ENST00000383955 105 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 RNU6-780P-201ENST00000391030 104 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF41Q9H4P4 PSPHP1-201ENST00000450062 261 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 SNRPFP3-201ENST00000457792 225 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 HMGB3P3-201ENST00000510526 400 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 Y_RNA.655-201ENST00000515919 96 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 SNORA25.17-201ENST00000517184 124 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AL138976.2-201ENST00000563989 694 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.18□□□□□ -2.06
RNF41Q9H4P4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AL670379.10-201ENST00000604330 253 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AL670379.9-201ENST00000605428 253 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AF250324.2-201ENST00000608299 610 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AC093788.1-201ENST00000609356 927 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AC024581.2-201ENST00000619986 252 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AC073534.2-201ENST00000620377 381 ntBASIC2.18□□□□□ -2.06
RNF41Q9H4P4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RNF41Q9H4P4 AP006437.1-201ENST00000641440 3685 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AL356292.1-201ENST00000283110 373 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 RNU6-843P-201ENST00000384454 104 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 MIR1289-2-201ENST00000408360 111 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 TIMM9P3-201ENST00000428659 274 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 RPL7P54-201ENST00000438336 674 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 RNU6-261P-201ENST00000459506 102 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 SRRM1P2-201ENST00000464531 1192 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AP001025.1-201ENST00000486139 332 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 Y_RNA.693-201ENST00000516641 110 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 SNORA43.2-201ENST00000516652 128 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 RNU6-295P-201ENST00000516901 104 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AK6P1-201ENST00000540219 478 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AC245505.1-201ENST00000556398 224 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 HULC.1-201ENST00000612720 240 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 Z69720.2-201ENST00000624755 279 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AP003400.5-201ENST00000624827 617 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AC099654.12-201ENST00000639868 649 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 AC002543.1-201ENST00000299783 1954 ntBASIC2.17□□□□□ -2.06
RNF41Q9H4P4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms