Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.4□□□□□ -2.03
SNX25Q9H3E2 RPL22P13-201ENST00000493291 347 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 ANXA2P1-201ENST00000505539 926 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 Y_RNA.704-201ENST00000516851 102 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 OR11H5P-201ENST00000554039 926 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 HMGB1P33-201ENST00000563485 527 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 APOOP1-201ENST00000604695 592 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 AC069294.1-201ENST00000608397 350 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 AC013412.1-201ENST00000610687 192 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.4□□□□□ -2.03
SNX25Q9H3E2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.4□□□□□ -2.03
SNX25Q9H3E2 ZNF658B-202ENST00000615961 3375 ntBASIC2.4□□□□□ -2.03
SNX25Q9H3E2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
SNX25Q9H3E2 RNU5E-7P-201ENST00000365290 117 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 SNORD37.1-201ENST00000390968 65 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 RNU6-908P-201ENST00000410160 94 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 SNORD56-201ENST00000413522 71 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 MTND1P23-201ENST00000416931 372 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.39□□□□□ -2.03
SNX25Q9H3E2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.39□□□□□ -2.03
SNX25Q9H3E2 RPS3AP44-201ENST00000425466 790 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.39□□□□□ -2.03
SNX25Q9H3E2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.39□□□□□ -2.03
SNX25Q9H3E2 AL353705.4-201ENST00000449661 238 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 AC006026.2-201ENST00000457376 180 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.39□□□□□ -2.03
SNX25Q9H3E2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.39□□□□□ -2.03
SNX25Q9H3E2 AC008526.1-201ENST00000509149 338 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNX25Q9H3E2 AC016957.1-201ENST00000534895 309 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 AC090897.2-201ENST00000581715 130 ntBASIC2.39□□□□□ -2.03
SNX25Q9H3E2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.39□□□□□ -2.03
SNX25Q9H3E2 MTND5P6-201ENST00000422338 1798 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNX25Q9H3E2 RNU6-1010P-201ENST00000362757 107 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 RNU6-529P-201ENST00000363383 104 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 Y_RNA.516-201ENST00000384541 124 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SNX25Q9H3E2 EIF4EP4-201ENST00000424916 578 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 C8orf59P1-201ENST00000429930 303 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AL365400.1-201ENST00000431854 640 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC007969.2-201ENST00000441891 191 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC013470.1-201ENST00000453438 462 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 RNU6-1038P-201ENST00000516516 104 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 RNU6-314P-201ENST00000516574 104 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX25Q9H3E2 SNRPGP18-201ENST00000553000 214 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.38□□□□□ -2.03
SNX25Q9H3E2 TPRKBP2-201ENST00000565969 475 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC012557.2-201ENST00000605919 418 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC096772.1-201ENST00000609146 564 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 U2.17-201ENST00000611454 95 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 HMGB1P24-202ENST00000615653 685 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC009233.1-201ENST00000616477 371 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 MIR6132-201ENST00000622083 109 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 AC139792.2-201ENST00000624218 587 ntBASIC2.38□□□□□ -2.03
SNX25Q9H3E2 MIRLET7G-201ENST00000362280 84 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 SNORD56.1-201ENST00000362913 68 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 SNORD114-19-201ENST00000363072 75 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 U8.2-201ENST00000363156 134 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 Y_RNA.167-201ENST00000363735 109 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 Y_RNA.554-201ENST00000384672 102 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 RNA5SP390-201ENST00000410191 113 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 RNU6-1068P-201ENST00000410958 103 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 AC138623.1-201ENST00000418060 216 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 AC003685.2-201ENST00000422795 395 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 AL121601.2-201ENST00000438019 707 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX25Q9H3E2 MTND3P16-201ENST00000452205 344 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 RNU7-26P-201ENST00000458980 63 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 AC090515.1-201ENST00000465295 476 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.37□□□□□ -2.03
SNX25Q9H3E2 AC109329.1-201ENST00000518744 317 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 CENPUP1-201ENST00000526649 1202 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 AC026464.5-201ENST00000562497 722 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX25Q9H3E2 MIR3941-201ENST00000582572 103 ntBASIC2.37□□□□□ -2.03
SNX25Q9H3E2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
SNX25Q9H3E2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.37□□□□□ -2.03
SNX25Q9H3E2 OR56A5-201ENST00000340110 738 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 Y_RNA.40-201ENST00000362645 93 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 RNU6-82P-201ENST00000363970 107 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 Y_RNA.378-201ENST00000365652 113 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 MIR181A1-201ENST00000385026 110 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 MIR514A2-201ENST00000385131 88 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 MIR514A3-201ENST00000385132 88 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AL590002.1-201ENST00000406554 418 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 DPH3P2-201ENST00000422618 250 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC008267.5-201ENST00000424928 265 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AL139415.2-201ENST00000431968 163 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 IPO7P1-201ENST00000442031 636 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 339.7 ms