Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC131280.1-202ENST00000624067 4211 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 RNU6-428P-201ENST00000362942 107 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 RNA5SP456-201ENST00000364002 114 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 RNU4-20P-201ENST00000365601 151 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 Y_RNA.378-201ENST00000365652 113 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 MIR544A-201ENST00000384855 91 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 RNU6-648P-201ENST00000410190 107 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 POLHP1-201ENST00000411806 470 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 MTND3P16-201ENST00000452205 344 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC087884.1-201ENST00000469738 328 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC008526.1-201ENST00000509149 338 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 RNU2-53P-201ENST00000516257 147 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC109479.2-201ENST00000517842 174 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 CENPUP1-201ENST00000526649 1202 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 CBX3P7-201ENST00000532876 502 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AL118558.2-201ENST00000556294 238 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 EIF1P4-201ENST00000572664 335 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC107304.1-201ENST00000604229 296 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 U4atac.1-201ENST00000618345 95 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 AC007792.1-201ENST00000623023 402 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 IGHVIII-44-202ENST00000636235 289 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UBQLN3Q9H347 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.27□□□□□ -2.05
UBQLN3Q9H347 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RNU1-72P-201ENST00000362976 153 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RNU6-105P-201ENST00000363909 104 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 U3.13-201ENST00000364804 214 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RNA5SP240-201ENST00000365355 128 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RNU6-1032P-201ENST00000384100 107 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RNU6-1215P-201ENST00000384441 102 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RNU6-293P-201ENST00000411259 106 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 USP9YP27-201ENST00000418455 438 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AC008267.5-201ENST00000424928 265 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 MTND3P21-201ENST00000433774 331 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AC124916.1-201ENST00000444020 547 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RPL39P29-201ENST00000447779 157 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AC011753.1-201ENST00000451001 220 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 CYP2C59P-201ENST00000457790 269 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 CYCSP27-201ENST00000527643 293 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AL138976.2-201ENST00000563989 694 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AL355297.2-201ENST00000604792 129 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AC009233.1-201ENST00000616477 371 ntBASIC2.26□□□□□ -2.05
UBQLN3Q9H347 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.26□□□□□ -2.05
UBQLN3Q9H347 RNU6-1090P-201ENST00000364065 94 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 RNU6-827P-201ENST00000365553 106 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 Y_RNA.516-201ENST00000384541 124 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 MIR181A1-201ENST00000385026 110 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 SNORA11.2-201ENST00000408318 127 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 RNU2-23P-201ENST00000410545 195 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 IFNA11P-201ENST00000446352 526 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 SNRPGP7-201ENST00000469016 106 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AK3P2-201ENST00000507976 429 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 SNORA14.1-201ENST00000516113 141 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC109329.1-201ENST00000518744 317 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC103996.1-201ENST00000555468 102 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC092807.2-201ENST00000609367 243 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC090517.3-201ENST00000625170 141 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 AC068137.4-201ENST00000638485 296 ntBASIC2.25□□□□□ -2.05
UBQLN3Q9H347 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
UBQLN3Q9H347 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
UBQLN3Q9H347 OR4G1P-203ENST00000641984 1631 ntBASIC2.24□□□□□ -2.05
UBQLN3Q9H347 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
UBQLN3Q9H347 RNU6-655P-201ENST00000362858 107 ntBASIC2.24□□□□□ -2.05
UBQLN3Q9H347 RNU6-82P-201ENST00000363970 107 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms