Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU6-968P-201ENST00000384076 107 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 RNU6-1179P-201ENST00000384667 107 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 MIR578-201ENST00000384828 96 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 SNORA26.9-201ENST00000391322 122 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL669831.1-202ENST00000428504 417 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 MTND2P4-201ENST00000445034 1004 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 RPL30P1-201ENST00000488676 339 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 MTCO3P9-201ENST00000506989 781 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AC009646.1-201ENST00000510455 318 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 AC137800.2-201ENST00000574375 120 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 MIR3118-1-201ENST00000581787 76 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AP001004.1-201ENST00000582468 324 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AC013244.2-201ENST00000603396 103 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL136363.2-201ENST00000604173 851 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 RNU4-5P-201ENST00000607255 135 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL157392.4-201ENST00000609756 345 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AC092106.3-201ENST00000611308 722 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 AL139418.1-201ENST00000613613 177 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 RNU6-809P-201ENST00000384461 107 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 BTF3L4P1-201ENST00000413813 468 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.91□□□□□ -2.26
VCX3BQ9H321 RPL21P90-201ENST00000415692 466 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 MTCO2P21-201ENST00000419780 677 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 JTBP1-201ENST00000441314 247 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 AL360271.2-201ENST00000447710 161 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.91□□□□□ -2.26
VCX3BQ9H321 MTATP6P14-201ENST00000455189 673 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.91□□□□□ -2.26
VCX3BQ9H321 snoU109.3-201ENST00000459477 145 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 YWHAEP4-201ENST00000505390 198 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 MTND2P33-201ENST00000506452 1031 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 RNA5SP337-201ENST00000517007 109 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 AC019176.1-201ENST00000518519 225 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.91□□□□□ -2.26
VCX3BQ9H321 BNIP3P6-201ENST00000549284 499 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 TRAV32-201ENST00000553993 340 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 ZNF519P3-201ENST00000557158 1032 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 SUB1P4-201ENST00000566062 339 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.91□□□□□ -2.26
VCX3BQ9H321 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 AL391646.1-201ENST00000603860 190 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 AC063943.3-201ENST00000615562 356 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 U6.42-201ENST00000618440 107 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 MIR8065-201ENST00000620577 100 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 AC130454.1-201ENST00000622948 401 ntBASIC0.91□□□□□ -2.26
VCX3BQ9H321 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.91□□□□□ -2.26
VCX3BQ9H321 AC073343.1-201ENST00000328239 651 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 RNU6-78P-201ENST00000362897 107 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 SNORD114-6-201ENST00000364393 72 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 RNU6-83P-201ENST00000384568 112 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 SNORA11-201ENST00000408789 128 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC013410.2-201ENST00000422627 201 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 MTND4P20-201ENST00000424125 869 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC084290.1-201ENST00000434995 374 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 KATNBL1P3-201ENST00000443475 909 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 SNORD13-201ENST00000459299 104 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 RPS29P21-201ENST00000496272 170 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC108078.2-201ENST00000510750 236 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC116347.2-201ENST00000514912 523 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 RNU6-123P-201ENST00000516163 102 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 ADI1P3-201ENST00000549509 470 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 CYP3A52P-201ENST00000563326 91 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 AL158032.1-201ENST00000605401 106 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
VCX3BQ9H321 AC008993.2-201ENST00000631744 806 ntBASIC0.9□□□□□ -2.27
VCX3BQ9H321 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
VCX3BQ9H321 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
VCX3BQ9H321 SNORD56.2-201ENST00000363242 71 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 RNU6-906P-201ENST00000384700 70 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 MIR122-201ENST00000385044 85 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AL355143.1-201ENST00000407101 841 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AL357139.1-201ENST00000407792 426 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 EEF1A1P40-201ENST00000412883 573 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms