Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC68Q9H2F9 RNU6-692P-201ENST00000384496 107 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 MIR29B2-201ENST00000385055 81 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC68Q9H2F9 TIMM9P3-201ENST00000428659 274 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 AC025750.2-201ENST00000442609 450 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC68Q9H2F9 RPS3P1-201ENST00000456781 192 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 RNU6-189P-201ENST00000516120 101 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 RNU7-193P-201ENST00000516723 65 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 CENPUP1-201ENST00000526649 1202 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 PRELID2P1-201ENST00000552837 301 ntBASIC2.53□□□□□ -2
CCDC68Q9H2F9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CCDC68Q9H2F9 RNU2-32P-201ENST00000411193 191 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 POLHP1-201ENST00000411806 470 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 EDDM3CP-201ENST00000415977 425 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AL590556.1-201ENST00000423231 483 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AC063976.3-201ENST00000426849 329 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 RNU7-138P-201ENST00000459479 64 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AC018868.1-201ENST00000491307 315 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 SNORA14.1-201ENST00000516113 141 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 Y_RNA.693-201ENST00000516641 110 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 RN7SKP256-201ENST00000517201 314 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AC243972.3-201ENST00000539655 198 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AC025165.5-201ENST00000602802 578 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AC092747.3-201ENST00000603769 301 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AC093783.1-201ENST00000612976 329 ntBASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CCDC68Q9H2F9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RNU6-82P-201ENST00000363970 107 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RNU6-546P-201ENST00000383991 107 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RNU6-38P-201ENST00000384085 107 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RNU6-1106P-201ENST00000390845 107 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RPS29P13-201ENST00000402041 169 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 AL162578.1-201ENST00000406202 378 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 MTCO2P7-201ENST00000446518 666 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RNU6-333P-201ENST00000459117 107 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RNU5F-2P-201ENST00000516066 82 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RNU6-835P-201ENST00000516974 104 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 AC034114.1-201ENST00000520293 285 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 AP000763.2-201ENST00000540641 163 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RPS3AP23-202ENST00000574601 686 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 VN1R107P-201ENST00000601784 209 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 AC063943.3-201ENST00000615562 356 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 AC012640.5-201ENST00000623897 319 ntBASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CCDC68Q9H2F9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 RNU6-1285P-201ENST00000363480 105 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 RNU4-40P-201ENST00000364351 143 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 RNU6-43P-201ENST00000384302 107 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 RPL17P50-201ENST00000396131 546 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 HMGB3P2-201ENST00000411913 584 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 RPL21P99-201ENST00000480369 423 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 RNU6-667P-201ENST00000517186 102 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AL512310.1-201ENST00000548639 172 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AC004908.3-201ENST00000610248 625 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AC022202.1-201ENST00000613515 211 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AC015540.1-201ENST00000615828 501 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AC131280.1-202ENST00000624067 4211 ntBASIC2.5□□□□□ -2.01
CCDC68Q9H2F9 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
CCDC68Q9H2F9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC68Q9H2F9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC68Q9H2F9 RNU6-623P-201ENST00000363143 105 ntBASIC2.49□□□□□ -2.01
CCDC68Q9H2F9 RNU6-944P-201ENST00000364023 107 ntBASIC2.49□□□□□ -2.01
CCDC68Q9H2F9 RNU6-1141P-201ENST00000364520 107 ntBASIC2.49□□□□□ -2.01
CCDC68Q9H2F9 RNU4-20P-201ENST00000365601 151 ntBASIC2.49□□□□□ -2.01
CCDC68Q9H2F9 Y_RNA.378-201ENST00000365652 113 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms