Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 LARP7P3-201ENST00000579888 337 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 BNIP3P25-201ENST00000596023 559 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.167-201ENST00000363735 109 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 SNORD113-7-201ENST00000363762 77 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-534P-201ENST00000364877 106 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 SNORA18.3-201ENST00000384122 132 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AL139281.1-201ENST00000422120 335 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AIMP1P2-201ENST00000425294 312 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 NDUFA5P4-201ENST00000436704 385 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AC107083.1-201ENST00000439643 279 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 MRPL50P4-201ENST00000446432 475 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.665-201ENST00000516177 98 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-1332P-201ENST00000516666 104 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AC104576.1-201ENST00000524225 88 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 EIF4BP1-201ENST00000554881 351 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AC009314.1-201ENST00000603871 304 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AL356157.2-201ENST00000605122 111 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AL627309.6-201ENST00000606857 840 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 RMST_3.1-201ENST00000611651 109 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 U4atac.1-201ENST00000618345 95 ntBASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.92□□□□□ -1.94
HERPUD2Q9BSE4 AC096644.4-201ENST00000563417 2912 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.100-201ENST00000363141 102 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-1141P-201ENST00000364520 107 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-1329P-201ENST00000365664 107 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-43P-201ENST00000384302 107 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 RNY3P14-201ENST00000384309 102 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 MIR561-201ENST00000385216 97 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 RN7SKP158-201ENST00000410453 326 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 RPL30P16-201ENST00000419341 429 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 AL590556.1-201ENST00000423231 483 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 AL139132.1-201ENST00000431587 344 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 AC007547.1-201ENST00000462177 490 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 IMMP1LP2-201ENST00000552954 492 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 MIR3662-201ENST00000637030 95 ntBASIC2.91□□□□□ -1.94
HERPUD2Q9BSE4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
HERPUD2Q9BSE4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HERPUD2Q9BSE4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HERPUD2Q9BSE4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.9□□□□□ -1.94
HERPUD2Q9BSE4 AL161431.1-201ENST00000618966 4205 ntBASIC2.9□□□□□ -1.94
HERPUD2Q9BSE4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.94
HERPUD2Q9BSE4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.530-201ENST00000384587 101 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 MIR1277-201ENST00000408536 78 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 RNA5SP118-201ENST00000410385 109 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC009161.1-201ENST00000417306 376 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 USP9YP20-201ENST00000419224 558 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 MTND4LP11-201ENST00000422184 280 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 SNAP23P1-201ENST00000433229 246 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC244670.1-201ENST00000436879 112 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 RBMX2P4-201ENST00000441256 376 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC098799.2-201ENST00000509466 868 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 HSPE1P4-201ENST00000550617 308 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC064836.2-201ENST00000609491 462 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC092794.1-201ENST00000612734 582 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC006386.2-201ENST00000624491 75 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC012005.1-201ENST00000624575 75 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
HERPUD2Q9BSE4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 RNU6-254P-201ENST00000363377 107 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 MIR29B2-201ENST00000385055 81 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 MIR95-201ENST00000385072 81 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 MTND1P23-201ENST00000416931 372 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 UBE2V1P4-201ENST00000425374 344 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC009238.1-201ENST00000442165 424 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC009237.6-201ENST00000446969 424 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 U8.21-201ENST00000459536 136 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 AC090525.1-201ENST00000479116 478 ntBASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.89□□□□□ -1.95
HERPUD2Q9BSE4 TRBVA-201ENST00000498804 316 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms