Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RPL17P35-201ENST00000432217 549 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AL591704.1-201ENST00000432574 275 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.71□□□□□ -2.3
LYSMD1Q96S90 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.71□□□□□ -2.3
LYSMD1Q96S90 RNU6-1315P-201ENST00000517187 99 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
LYSMD1Q96S90 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AL512310.8-201ENST00000550183 120 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.71□□□□□ -2.3
LYSMD1Q96S90 HSPE1P4-201ENST00000550617 308 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AP003465.2-201ENST00000602571 373 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AC016727.2-201ENST00000603988 621 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AP000654.2-201ENST00000605633 586 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AC104985.3-201ENST00000623479 597 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AC027335.2-201ENST00000624030 375 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AL163152.1-201ENST00000642001 374 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 RNU6-236P-201ENST00000363886 106 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 SNORA25-201ENST00000384384 134 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 AL357139.1-201ENST00000407792 426 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 RPS15AP10-201ENST00000432472 382 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 MTCYBP42-201ENST00000444653 1130 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 AC097473.1-201ENST00000508142 408 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 RNU6-1092P-201ENST00000516955 87 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 AC092325.1-201ENST00000566449 554 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 MTATP6P25-201ENST00000574491 261 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 MIR4661-201ENST00000582720 75 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 MZT1P2-201ENST00000604387 248 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
LYSMD1Q96S90 AC063943.3-201ENST00000615562 356 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 RMST_4.1-201ENST00000616886 107 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
LYSMD1Q96S90 RNU6-942P-201ENST00000363002 107 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 RNU1-36P-201ENST00000365130 165 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 MIR520A-201ENST00000384862 85 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 MIR515-2-201ENST00000384883 83 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 MIR515-1-201ENST00000384884 83 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
LYSMD1Q96S90 MIR548J-201ENST00000408833 112 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 RNA5SP390-201ENST00000410191 113 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AC083875.1-201ENST00000419509 405 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 PAXBP1P1-201ENST00000449315 447 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.69□□□□□ -2.3
LYSMD1Q96S90 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LYSMD1Q96S90 RPS27AP8-201ENST00000452665 445 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 MTND1P16-201ENST00000465177 898 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AC134050.1-201ENST00000495088 933 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AL157871.3-201ENST00000557231 293 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AL132657.2-201ENST00000564417 358 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 BNIP3P31-201ENST00000604515 566 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AC007363.1-201ENST00000604736 620 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 AL022345.2-201ENST00000606307 135 ntBASIC0.69□□□□□ -2.3
LYSMD1Q96S90 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
LYSMD1Q96S90 MTND5P33-201ENST00000571250 1450 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 Y_RNA.116-201ENST00000363292 103 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 Y_RNA.534-201ENST00000384599 112 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 Y_RNA.578-201ENST00000390903 88 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 FCF1P10-201ENST00000407590 479 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 RNU2-7P-201ENST00000410794 178 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.68□□□□□ -2.3
LYSMD1Q96S90 SNX2P2-201ENST00000424553 323 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.68□□□□□ -2.3
LYSMD1Q96S90 RPS4XP11-201ENST00000446897 772 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 EEF1E1P1-201ENST00000446998 430 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 HSPE1P13-201ENST00000451143 297 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.68□□□□□ -2.3
LYSMD1Q96S90 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.68□□□□□ -2.3
LYSMD1Q96S90 SCARNA16.2-201ENST00000516520 172 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 OR8K2P-201ENST00000524645 927 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 DEFB108E-201ENST00000524692 240 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.68□□□□□ -2.3
LYSMD1Q96S90 AC087897.1-201ENST00000550134 156 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 AL137100.2-201ENST00000555786 315 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 AC099785.1-201ENST00000605697 437 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 AC012467.1-201ENST00000607740 256 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 AL021879.1-201ENST00000611756 288 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 AC007792.1-201ENST00000623023 402 ntBASIC0.68□□□□□ -2.3
LYSMD1Q96S90 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.68□□□□□ -2.3
LYSMD1Q96S90 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
LYSMD1Q96S90 snoZ40.1-201ENST00000364540 72 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 RNU6-609P-201ENST00000365459 107 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 MIR548B-201ENST00000385247 97 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
LYSMD1Q96S90 USP9YP33-201ENST00000412220 421 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms