Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL596028.1-201ENST00000326971 197 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.10-201ENST00000362371 110 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-858P-201ENST00000362436 107 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 MIR569-201ENST00000385228 96 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AL080315.1-201ENST00000406055 466 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 USP9YP33-201ENST00000412220 421 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 HMGN1P33-201ENST00000432945 451 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RPL23AP15-201ENST00000450202 459 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC108145.1-201ENST00000503770 153 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-311P-201ENST00000516224 102 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU2-56P-201ENST00000516826 190 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AP004371.1-201ENST00000525240 214 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AL031595.2-201ENST00000624215 19071 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-266P-201ENST00000364225 107 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-890P-201ENST00000384121 107 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-14P-201ENST00000384630 106 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 SNORA41-201ENST00000384675 132 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AL391417.1-201ENST00000404100 426 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RAC1P3-201ENST00000416129 580 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 HMGB1P27-201ENST00000431429 603 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 CDC42P1-201ENST00000456658 548 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC078817.1-201ENST00000492623 435 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC092436.3-201ENST00000511788 257 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU7-61P-201ENST00000515897 61 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-408P-201ENST00000515910 100 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU1-86P-201ENST00000516108 154 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-947P-201ENST00000516264 106 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU1-107P-201ENST00000516617 154 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU7-160P-201ENST00000516660 62 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-1137P-201ENST00000517073 99 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC231759.1-201ENST00000616455 597 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC130448.2-201ENST00000624082 374 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC241585.2-209ENST00000638217 143 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-495P-201ENST00000362995 107 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.112-201ENST00000363250 102 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.158-201ENST00000363651 101 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-1090P-201ENST00000364065 94 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU1-59P-201ENST00000364829 162 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-793P-201ENST00000384233 104 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 MIR181B2-201ENST00000385004 89 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 SNORA3.3-201ENST00000408712 125 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AL359704.1-201ENST00000411586 781 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC010385.1-201ENST00000412374 256 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AL139281.1-201ENST00000422120 335 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AL591419.1-201ENST00000427423 339 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 EEF1B2P7-201ENST00000451177 676 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 SNRPGP9-201ENST00000456025 225 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 COX6CP14-201ENST00000469580 174 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC112184.1-201ENST00000505179 312 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC005921.1-201ENST00000510589 286 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 NOP56P3-201ENST00000549457 385 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC091178.1-203ENST00000584586 279 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC010591.1-201ENST00000603941 649 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 U1.25-201ENST00000614085 162 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 U1.31-201ENST00000620022 160 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU6-251P-201ENST00000363235 104 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU6-940P-201ENST00000363433 104 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU6-99P-201ENST00000364721 107 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.288-201ENST00000364854 92 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MIR518E-201ENST00000385252 88 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MIR643-201ENST00000385267 97 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RN7SKP192-201ENST00000411291 327 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RPL35AP22-201ENST00000436855 335 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MTND4LP30-201ENST00000454092 297 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC078785.3-201ENST00000476607 425 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms