Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NEK1Q96PY6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 Y_RNA.324-201ENST00000365165 102 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 Y_RNA.402-201ENST00000383972 102 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 MIR548F1-201ENST00000408667 84 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 CALM1P1-201ENST00000442082 433 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 MTCO3P38-201ENST00000468910 766 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 MTAPP1-201ENST00000489154 819 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 CCDC34P1-201ENST00000507441 517 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 MTND1P35-201ENST00000526739 508 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 AL157687.1-201ENST00000554853 619 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 AC146944.4-201ENST00000602697 718 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 AC080078.2-201ENST00000603766 501 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 Z82243.1-201ENST00000609432 473 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 RMST_4.1-201ENST00000616886 107 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 U4.5-201ENST00000617137 123 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.67□□□□□ -1.98
NEK1Q96PY6 MIR1321-201ENST00000637766 79 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 ZNF72P-201ENST00000425869 1908 ntBASIC2.67□□□□□ -1.98
NEK1Q96PY6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NEK1Q96PY6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NEK1Q96PY6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
NEK1Q96PY6 MIR764-201ENST00000390811 85 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 AL133475.1-201ENST00000404414 305 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 CIR1P3-201ENST00000405137 479 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 BTF3P7-201ENST00000407097 488 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 RNU6-648P-201ENST00000410190 107 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 MTND3P16-201ENST00000452205 344 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.66□□□□□ -1.98
NEK1Q96PY6 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.66□□□□□ -1.98
NEK1Q96PY6 AL121769.1-201ENST00000469473 401 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 RNU6-718P-201ENST00000516166 105 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 SNORA31.6-201ENST00000516241 130 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.66□□□□□ -1.98
NEK1Q96PY6 BTF3P12-201ENST00000519620 469 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 AP004607.1-201ENST00000524456 203 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.66□□□□□ -1.98
NEK1Q96PY6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.66□□□□□ -1.98
NEK1Q96PY6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NEK1Q96PY6 MIR4424-201ENST00000585257 86 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 AC002044.1-201ENST00000606707 158 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 AC245884.12-201ENST00000615364 59 ntBASIC2.66□□□□□ -1.98
NEK1Q96PY6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NEK1Q96PY6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NEK1Q96PY6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NEK1Q96PY6 MTND4P27-201ENST00000450813 1354 ntBASIC2.65□□□□□ -1.98
NEK1Q96PY6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NEK1Q96PY6 Y_RNA.38-201ENST00000362617 102 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 RNU6-38P-201ENST00000384085 107 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 MIR221-201ENST00000385135 110 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 RNA5SP219-201ENST00000390940 113 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 SNORD115-47-201ENST00000391226 86 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 RAP1BP3-201ENST00000407180 549 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 Y_RNA.619-201ENST00000410951 90 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 FCF1P9-201ENST00000412546 282 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.65□□□□□ -1.99
NEK1Q96PY6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.65□□□□□ -1.99
NEK1Q96PY6 HMGB1P31-201ENST00000437242 427 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC012308.1-201ENST00000451232 178 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 RNU6-333P-201ENST00000459117 107 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 RNU7-167P-201ENST00000459160 62 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.65□□□□□ -1.99
NEK1Q96PY6 RPL21P99-201ENST00000480369 423 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 SNORA31.11-201ENST00000516528 139 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC109635.3-201ENST00000529536 185 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC136619.2-201ENST00000563361 631 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC023824.2-201ENST00000566185 400 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.65□□□□□ -1.99
NEK1Q96PY6 AC122108.2-201ENST00000611946 526 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 SCARNA4-202ENST00000625402 129 ntBASIC2.65□□□□□ -1.99
NEK1Q96PY6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
NEK1Q96PY6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NEK1Q96PY6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NEK1Q96PY6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
NEK1Q96PY6 RNU6-37P-201ENST00000362692 107 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 RNU6-11P-201ENST00000364234 107 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 RNU4-20P-201ENST00000365601 151 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 RNU6-25P-201ENST00000383873 107 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 RNU6-1-201ENST00000383898 107 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 Y_RNA.399-201ENST00000383955 105 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 RNU6-48P-201ENST00000384161 107 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 RNU6-36P-201ENST00000384172 107 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 Y_RNA.450-201ENST00000384198 113 ntBASIC2.64□□□□□ -1.99
NEK1Q96PY6 RNU6-4P-201ENST00000384205 107 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms