Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RPS4XP13-201ENST00000483219 789 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 RNA5SP471-201ENST00000516971 106 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 HSPE1P5-201ENST00000561489 272 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 MIR5685-201ENST00000579080 79 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AL160290.3-201ENST00000604869 165 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AL138721.1-201ENST00000616756 179 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AC007546.2-201ENST00000623996 360 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 MIR4275-201ENST00000636486 87 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 Y_RNA.280-201ENST00000364765 112 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 MIR548A1-201ENST00000385041 97 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 MIR483-201ENST00000385070 76 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 MIR616-201ENST00000385293 97 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 RNU6-159P-201ENST00000391080 106 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 RNU6-554P-201ENST00000410466 106 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 RNU6-1199P-201ENST00000411249 104 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 RNU6-592P-201ENST00000411333 103 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 SSXP9-201ENST00000417503 292 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 FTH1P24-201ENST00000503502 462 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 RN7SKP12-201ENST00000516275 143 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 AC012468.1-201ENST00000604888 430 ntBASIC4.94□□□□□ -1.62
TRIM47Q96LD4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
TRIM47Q96LD4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 SAGE4P-201ENST00000442271 3381 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AL353743.1-202ENST00000431724 1695 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 Y_RNA.24-201ENST00000362508 103 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 RNA5SP124-201ENST00000362739 110 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 Y_RNA.293-201ENST00000364908 93 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 SNORD78.1-201ENST00000390866 65 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 MIR888-201ENST00000401186 77 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 EDDM3CP-201ENST00000415977 425 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AC091390.3-201ENST00000426478 338 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 RPL21P66-201ENST00000426566 466 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AC245047.8-201ENST00000456455 284 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AL592156.1-201ENST00000508758 304 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 IGLV3-26-201ENST00000520756 302 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 MIR4716-201ENST00000579628 84 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AL606490.9-201ENST00000603331 271 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AL078604.3-201ENST00000615580 211 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AP001318.4-201ENST00000616637 121 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AC131238.1-201ENST00000617135 328 ntBASIC4.93□□□□□ -1.62
TRIM47Q96LD4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM47Q96LD4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 RNU5A-1-201ENST00000362698 116 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 RNA5SP307-201ENST00000362863 116 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 RPS20P14-201ENST00000412545 360 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 AC138623.1-201ENST00000418060 216 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 CYCSP49-201ENST00000420810 319 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 AC010265.1-201ENST00000513509 211 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 AC084851.1-201ENST00000529105 249 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 SNORA51-201ENST00000606420 132 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms