Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
IFT43Q96FT9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.4□□□□□ -1.71
IFT43Q96FT9 AC021739.1-201ENST00000559631 174 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 MIR3690-201ENST00000580266 75 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.4□□□□□ -1.71
IFT43Q96FT9 AC068831.7-201ENST00000616954 363 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
IFT43Q96FT9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
IFT43Q96FT9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
IFT43Q96FT9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.4□□□□□ -1.71
IFT43Q96FT9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
IFT43Q96FT9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
IFT43Q96FT9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
IFT43Q96FT9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
IFT43Q96FT9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
IFT43Q96FT9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
IFT43Q96FT9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
IFT43Q96FT9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
IFT43Q96FT9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
IFT43Q96FT9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
IFT43Q96FT9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
IFT43Q96FT9 SNORA72.2-201ENST00000365028 127 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 RNA5SP167-201ENST00000365461 116 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 RNU6-959P-201ENST00000384671 107 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 SNORA57.1-201ENST00000391227 145 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 RPS26P8-201ENST00000393490 348 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 RNA5SP306-201ENST00000411087 107 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 FTH1P6-201ENST00000430768 320 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.39□□□□□ -1.71
IFT43Q96FT9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.39□□□□□ -1.71
IFT43Q96FT9 PARP4P3-201ENST00000510265 317 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.39□□□□□ -1.71
IFT43Q96FT9 RNU6-928P-201ENST00000516876 104 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 RN7SKP289-201ENST00000517244 295 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 AL020997.2-201ENST00000602607 184 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.39□□□□□ -1.71
IFT43Q96FT9 AC140479.6-201ENST00000633535 357 ntBASIC4.39□□□□□ -1.71
IFT43Q96FT9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
IFT43Q96FT9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
IFT43Q96FT9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
IFT43Q96FT9 ADAM3A-203ENST00000461344 2157 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
IFT43Q96FT9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 MTND5P35-201ENST00000557537 1720 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
IFT43Q96FT9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
IFT43Q96FT9 RNU1-15P-201ENST00000353977 144 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 Y_RNA.81-201ENST00000362997 102 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 RNU6-1285P-201ENST00000363480 105 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 RNU4-56P-201ENST00000364700 142 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 SNORD116-18-201ENST00000383961 92 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 Y_RNA.497-201ENST00000384447 98 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 AL357139.1-201ENST00000407792 426 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 MIR1193-201ENST00000408109 78 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 RPL30P12-201ENST00000474666 353 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC105137.1-201ENST00000484355 562 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 RNU5F-8P-201ENST00000515941 111 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 MRPL49P2-201ENST00000521066 465 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC055872.1-201ENST00000570978 278 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 MIR492-201ENST00000638676 116 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.38□□□□□ -1.71
IFT43Q96FT9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC110491.1-201ENST00000562191 2010 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 AC007656.2-201ENST00000624902 4547 ntBASIC4.38□□□□□ -1.71
IFT43Q96FT9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNU6-1290P-201ENST00000362957 109 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNU6-653P-201ENST00000363074 106 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 Y_RNA.179-201ENST00000363844 90 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNU6-487P-201ENST00000365430 104 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNU6-211P-201ENST00000384047 107 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNU6-417P-201ENST00000384712 107 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 SNORA11-201ENST00000408789 128 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNU5E-9P-201ENST00000411164 104 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 BPY2DP-201ENST00000422208 265 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 AC009237.7-201ENST00000447357 229 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNU6-625P-201ENST00000459412 107 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNU6-313P-201ENST00000516317 112 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 AP004242.1-201ENST00000533701 349 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 AC018448.1-201ENST00000552843 316 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 AC090897.2-201ENST00000581715 130 ntBASIC4.37□□□□□ -1.71
IFT43Q96FT9 AL133393.1-201ENST00000603277 287 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms