Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC107626.1-201ENST00000471084 183 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 MED28P2-201ENST00000475771 317 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AC114801.2-201ENST00000503825 781 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 HMGN1P13-201ENST00000505795 138 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 SMURF2P1-201ENST00000514992 481 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 CR383656.8-201ENST00000549046 145 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AL355877.2-201ENST00000603670 358 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 MTND4LP32-201ENST00000636111 270 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 MIR3529-201ENST00000637713 78 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AC006026.1-201ENST00000444025 1803 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AC010889.1-201ENST00000566193 2666 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 FAM35CP-201ENST00000554755 2470 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 RNU6-799P-201ENST00000363567 107 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 RNU6-694P-201ENST00000364071 147 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 RNU6-1317P-201ENST00000364582 104 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 SNORA70B-201ENST00000384210 135 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 RNU6-750P-201ENST00000390946 107 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 RNY4P36-201ENST00000391116 96 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 MTCYBP4-201ENST00000401524 249 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AL513475.1-201ENST00000406602 315 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 RPL31P12-201ENST00000422587 358 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AL365496.1-201ENST00000426885 215 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC021205.2-201ENST00000480069 347 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 APOOP3-201ENST00000536787 586 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 HPRT1P3-201ENST00000539521 576 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC018889.1-201ENST00000605372 397 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC018462.2-201ENST00000605375 395 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC005046.1-201ENST00000608515 625 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AL133215.3-201ENST00000609801 448 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC133104.2-201ENST00000615272 193 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 MIR7843-201ENST00000622274 79 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC138627.2-201ENST00000624202 601 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 AC008669.1-201ENST00000565823 2178 ntBASIC3.24□□□□□ -1.89
TRIM43Q96BQ3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 PWAR6-201ENST00000552334 4618 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 RNA5SP139-201ENST00000364340 117 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 MIR147B-201ENST00000390185 80 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 RPS29P13-201ENST00000402041 169 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 RNU6-1050P-201ENST00000410388 107 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 Z82205.1-201ENST00000428456 297 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 Y_RNA.653-201ENST00000459091 95 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AC133134.1-201ENST00000466800 359 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AC008413.1-201ENST00000511864 177 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 ACA59.1-201ENST00000515966 143 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 RNU6-612P-201ENST00000516909 102 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 SNORA31.18-201ENST00000517043 134 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 Y_RNA.718-201ENST00000517110 102 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 VN1R107P-201ENST00000601784 209 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AC091152.3-201ENST00000604227 325 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AL050343.2-201ENST00000607338 280 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AC084781.2-201ENST00000615568 161 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AC007318.2-201ENST00000620999 243 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AC097372.5-201ENST00000623665 376 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.23□□□□□ -1.89
TRIM43Q96BQ3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AC096644.4-201ENST00000563417 2912 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 SNORD56.1-201ENST00000362913 68 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 RNU6-1188P-201ENST00000363795 107 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 MIR521-1-201ENST00000384902 87 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 SNORA75.4-201ENST00000391278 119 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 BMS1P22-201ENST00000414726 313 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 SAR1AP4-201ENST00000429225 591 ntBASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM43Q96BQ3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms