Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC009878.1-201ENST00000621819 340 ntBASIC1.43□□□□□ -2.18
APH1AQ96BI3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.43□□□□□ -2.18
APH1AQ96BI3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
APH1AQ96BI3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 MIR424-201ENST00000362227 98 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 MIR126-201ENST00000362291 85 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 RNU6-661P-201ENST00000362409 107 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 RPL21P90-201ENST00000415692 466 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 Z73417.1-201ENST00000447373 778 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 RPL39P29-201ENST00000447779 157 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 RBBP4P6-201ENST00000508098 202 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 AL356057.1-201ENST00000533798 831 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 AC022880.1-201ENST00000534017 973 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 TRAV32-201ENST00000553993 340 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 AC063943.3-201ENST00000615562 356 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 AC131159.1-201ENST00000621854 213 ntBASIC1.42□□□□□ -2.18
APH1AQ96BI3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
APH1AQ96BI3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 ZNF72P-201ENST00000425869 1908 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNU6-23P-201ENST00000363283 107 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNA5SP99-201ENST00000364020 114 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNU6-641P-201ENST00000384006 107 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNU6-160P-201ENST00000384591 107 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 SNORA67.5-201ENST00000391036 107 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNA5SP111-201ENST00000411386 101 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 AL122001.1-201ENST00000457027 370 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 SNORD11.1-201ENST00000459482 85 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 FAM206BP-201ENST00000510179 541 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNU6-991P-201ENST00000516168 107 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 RNVU1-2-201ENST00000516326 135 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 RN7SKP219-201ENST00000516825 296 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 AC002400.1-201ENST00000569310 726 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.41□□□□□ -2.18
APH1AQ96BI3 MIR3169-201ENST00000578032 83 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 HMGN1P30-201ENST00000589286 268 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 AC018889.1-201ENST00000605372 397 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 AC099654.13-201ENST00000639774 207 ntBASIC1.41□□□□□ -2.18
APH1AQ96BI3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
APH1AQ96BI3 RNU6-1214P-201ENST00000363650 109 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 RNA5SP493-201ENST00000364115 91 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 RNU4-28P-201ENST00000364739 141 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.4□□□□□ -2.19
APH1AQ96BI3 RNU2-3P-201ENST00000410144 191 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 RNU6-607P-201ENST00000411283 108 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AL590556.1-201ENST00000423231 483 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AL513185.2-201ENST00000425543 193 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 CALM2P2-201ENST00000428512 440 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.4□□□□□ -2.19
APH1AQ96BI3 MTND2P14-201ENST00000482139 351 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.4□□□□□ -2.19
APH1AQ96BI3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.4□□□□□ -2.19
APH1AQ96BI3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.4□□□□□ -2.19
APH1AQ96BI3 AC022616.3-201ENST00000523940 148 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AC115990.1-201ENST00000526957 301 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AC087441.2-201ENST00000529141 262 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 MIR4769-201ENST00000584126 77 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AC073539.2-201ENST00000597113 165 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AP000654.2-201ENST00000605633 586 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 MIR7844-201ENST00000616161 122 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AL359740.1-201ENST00000624340 592 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 AC019226.2-201ENST00000625973 424 ntBASIC1.4□□□□□ -2.19
APH1AQ96BI3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.4□□□□□ -2.19
APH1AQ96BI3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.39□□□□□ -2.19
APH1AQ96BI3 SNORD32B-201ENST00000364460 84 ntBASIC1.39□□□□□ -2.19
APH1AQ96BI3 RNA5SP213-201ENST00000391031 106 ntBASIC1.39□□□□□ -2.19
APH1AQ96BI3 RPL23AP32-201ENST00000395315 459 ntBASIC1.39□□□□□ -2.19
APH1AQ96BI3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.39□□□□□ -2.19
APH1AQ96BI3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
APH1AQ96BI3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.39□□□□□ -2.19
APH1AQ96BI3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.39□□□□□ -2.19
APH1AQ96BI3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.39□□□□□ -2.19
APH1AQ96BI3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.39□□□□□ -2.19
APH1AQ96BI3 AC104806.1-201ENST00000508720 308 ntBASIC1.39□□□□□ -2.19
APH1AQ96BI3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.39□□□□□ -2.19
APH1AQ96BI3 RNU5F-2P-201ENST00000516066 82 ntBASIC1.39□□□□□ -2.19
APH1AQ96BI3 Y_RNA.672-201ENST00000516289 104 ntBASIC1.39□□□□□ -2.19
APH1AQ96BI3 MRPS36P3-201ENST00000519284 130 ntBASIC1.39□□□□□ -2.19
APH1AQ96BI3 MTND2P32-201ENST00000521584 1038 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms