Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.21□□□□□ -1.9
SCAMP4Q969E2 MIR4474-201ENST00000579189 78 ntBASIC3.21□□□□□ -1.9
SCAMP4Q969E2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAMP4Q969E2 AL606534.2-204ENST00000635008 178 ntBASIC3.21□□□□□ -1.9
SCAMP4Q969E2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
SCAMP4Q969E2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.21□□□□□ -1.9
SCAMP4Q969E2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAMP4Q969E2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AC091152.2-201ENST00000591628 2569 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AC007496.3-201ENST00000624987 3443 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MIR544A-201ENST00000384855 91 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MIR625-201ENST00000385047 85 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AL356057.3-201ENST00000402607 340 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 RNU6-985P-201ENST00000410182 104 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 RNA5SP494-201ENST00000410653 129 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AC007098.1-201ENST00000420122 367 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AL353752.1-201ENST00000454946 260 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AL136097.1-201ENST00000456945 913 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 RNU7-169P-201ENST00000459456 61 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AC015911.1-201ENST00000495111 156 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 RNU7-4P-201ENST00000516961 62 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AL590705.4-201ENST00000532209 134 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 HSBP1P1-201ENST00000555205 166 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MIR5701-3-201ENST00000578890 82 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MIR5701-1-201ENST00000585138 82 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 SNORD58B-201ENST00000607313 66 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MIR5701-2-201ENST00000615634 82 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MIR3529-201ENST00000637713 78 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 ZNF72P-201ENST00000425869 1908 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 AC091812.1-201ENST00000432235 1948 ntBASIC3.2□□□□□ -1.9
SCAMP4Q969E2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCAMP4Q969E2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 RNU6-843P-201ENST00000384454 104 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 MIR23A-201ENST00000385245 73 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 Y_RNA.605-201ENST00000410577 105 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 BX679664.1-201ENST00000434429 253 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 AC007969.2-201ENST00000441891 191 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 RPS3AP12-201ENST00000443616 753 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 AC097462.2-201ENST00000504623 481 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 AC091874.1-201ENST00000511402 339 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 RNU6-764P-201ENST00000516396 105 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 SNORA70.24-201ENST00000517233 118 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 RN7SKP57-201ENST00000517248 293 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 AC093908.1-201ENST00000623125 8092 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 AC010680.1-201ENST00000590024 3590 ntBASIC3.19□□□□□ -1.9
SCAMP4Q969E2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAMP4Q969E2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
SCAMP4Q969E2 AC008669.1-201ENST00000565823 2178 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 RNU4-42P-201ENST00000364738 142 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 Y_RNA.389-201ENST00000383924 113 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SCAMP4Q969E2 Y_RNA.645-201ENST00000391229 102 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 RNU4-47P-201ENST00000410876 114 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 MTCO3P29-201ENST00000432119 779 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 AL353705.1-201ENST00000433468 480 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 MTND3P2-201ENST00000438452 342 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 CHEK2P4-201ENST00000450340 246 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 RN7SL863P-201ENST00000462370 296 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 AC109925.1-201ENST00000478069 331 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 SNORA31.21-201ENST00000517180 77 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 MRPS36P4-201ENST00000534436 298 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.18□□□□□ -1.9
SCAMP4Q969E2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
SCAMP4Q969E2 AC060766.3-201ENST00000591442 263 ntBASIC3.18□□□□□ -1.9
SCAMP4Q969E2 7SK.7-201ENST00000603504 247 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms