Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 FO393415.2-201ENST00000480085 343 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.63□□□□□ -1.83
SYNE4Q8N205 RNA5SP217-201ENST00000515959 91 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 RNU1-86P-201ENST00000516108 154 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 RNU6-1143P-201ENST00000516125 104 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 RNU6-927P-201ENST00000516199 100 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 SCARNA15.2-201ENST00000516409 127 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 RNU1-107P-201ENST00000516617 154 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 AP005902.1-201ENST00000521358 186 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.63□□□□□ -1.83
SYNE4Q8N205 SUB1P3-201ENST00000564581 315 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 MIR3921-201ENST00000577308 85 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 MIR5188-201ENST00000583467 113 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 AC012531.5-201ENST00000611375 151 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 AL021879.1-201ENST00000611756 288 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE4Q8N205 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SYNE4Q8N205 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE4Q8N205 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE4Q8N205 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE4Q8N205 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SYNE4Q8N205 MIR423-201ENST00000362201 94 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 Y_RNA.257-201ENST00000364596 102 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 DEFB109C-201ENST00000382575 264 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 DEFB109B-201ENST00000382656 264 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 RNU6-174P-201ENST00000410406 106 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SYNE4Q8N205 AL513477.1-202ENST00000417061 214 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AL159169.1-201ENST00000421119 127 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.62□□□□□ -1.83
SYNE4Q8N205 RPL27AP8-201ENST00000424277 446 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 UBE2D3P2-201ENST00000424409 445 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AL592045.1-201ENST00000429867 352 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.62□□□□□ -1.83
SYNE4Q8N205 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.62□□□□□ -1.83
SYNE4Q8N205 AL031274.1-201ENST00000450334 232 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 SNORD109B-201ENST00000458961 67 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 SNORD109A-201ENST00000459128 67 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 RPL7P5-201ENST00000471472 736 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AC022493.1-201ENST00000492984 337 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 RNU6-475P-201ENST00000516073 104 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 RNU6-1256P-201ENST00000516539 103 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.62□□□□□ -1.83
SYNE4Q8N205 AC023442.1-201ENST00000531247 422 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 OR5D17P-201ENST00000531492 978 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AC023157.2-201ENST00000540596 141 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.62□□□□□ -1.83
SYNE4Q8N205 LRRC37A5P-203ENST00000580181 585 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.62□□□□□ -1.83
SYNE4Q8N205 AL355297.3-201ENST00000604082 446 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AC100812.1-201ENST00000607622 580 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 HMGB1P24-202ENST00000615653 685 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 AC090132.2-201ENST00000615881 347 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 MIR8062-201ENST00000621515 85 ntBASIC3.62□□□□□ -1.83
SYNE4Q8N205 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SYNE4Q8N205 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SYNE4Q8N205 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE4Q8N205 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE4Q8N205 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE4Q8N205 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE4Q8N205 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE4Q8N205 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE4Q8N205 Y_RNA.39-201ENST00000362620 98 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 RNU4-42P-201ENST00000364738 142 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 Y_RNA.483-201ENST00000384380 101 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 RNU6-607P-201ENST00000411283 108 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 AL030996.1-201ENST00000411430 235 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 ELOCP20-201ENST00000422460 345 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 SUMO1P3-201ENST00000439961 304 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 UBL5P3-201ENST00000475112 231 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 AL359273.1-201ENST00000510918 627 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 RNU6-408P-201ENST00000515910 100 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 Y_RNA.715-201ENST00000517082 110 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 AP004242.1-201ENST00000533701 349 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 MIR3690-201ENST00000580266 75 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 AC078899.3-201ENST00000599065 212 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 AC024153.1-201ENST00000603103 365 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 RAC1P9-201ENST00000604990 392 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 MIR3976-201ENST00000606807 139 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 Z99571.1-201ENST00000636677 394 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE4Q8N205 AC096644.4-201ENST00000563417 2912 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE4Q8N205 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE4Q8N205 AL355596.1-201ENST00000565399 3996 ntBASIC3.61□□□□□ -1.83
SYNE4Q8N205 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE4Q8N205 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE4Q8N205 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.6□□□□□ -1.83
SYNE4Q8N205 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SYNE4Q8N205 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms