Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 Z94722.1-201ENST00000604328 474 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AC063944.3-201ENST00000609969 533 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AL773524.1-201ENST00000614065 229 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AC002543.1-201ENST00000299783 1954 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 U3.4-201ENST00000363352 213 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 RNU4-91P-201ENST00000364778 135 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 RNU6-116P-201ENST00000384042 109 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 RNU6-1274P-201ENST00000384557 107 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 GPR143P-201ENST00000434155 205 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 AC027575.1-201ENST00000481064 460 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 CKS1BP2-201ENST00000497342 240 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 DUXAP5-201ENST00000529668 529 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 MIR3126-201ENST00000577443 74 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 MIR5692A1-201ENST00000580523 69 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 AC091834.1-201ENST00000614543 472 ntBASIC1.84□□□□□ -2.11
CCDC65Q8IXS2 RNU6-78P-201ENST00000362897 107 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 SNORA62.1-201ENST00000364287 154 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 RNY3P10-201ENST00000384764 102 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 MIR454-201ENST00000390180 115 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AL627390.1-201ENST00000396055 340 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 MIR1289-2-201ENST00000408360 111 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 MIR1261-201ENST00000408659 82 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC244636.1-201ENST00000421152 228 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 MTCO2P34-201ENST00000421994 607 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC092447.3-201ENST00000426027 686 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 HMGB1P31-201ENST00000437242 427 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC010095.1-201ENST00000443543 144 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC007677.1-201ENST00000445757 515 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC079781.2-201ENST00000446424 169 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC079448.1-201ENST00000449377 373 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AL353752.1-201ENST00000454946 260 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 SNORA18.6-201ENST00000516792 115 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 RNU6-586P-201ENST00000517265 104 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 CYCSP27-201ENST00000527643 293 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 MIR4255-201ENST00000579351 72 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AL158827.2-201ENST00000602494 330 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 ELOCP5-201ENST00000604924 333 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 MIR98-201ENST00000606724 119 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC008121.3-201ENST00000618726 433 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC091931.1-201ENST00000623488 728 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AL691447.3-201ENST00000635020 330 ntBASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC65Q8IXS2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 RNU6-1097P-201ENST00000363586 107 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 RNU6-45P-201ENST00000384471 107 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 CBX3P9-201ENST00000402326 552 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 BTF3L4P1-201ENST00000413813 468 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 VN1R36P-201ENST00000414936 291 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 BX295541.1-201ENST00000417774 250 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 RPS27AP8-201ENST00000452665 445 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 AC137800.2-201ENST00000574375 120 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 AL132822.1-201ENST00000617063 513 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 AC026585.1-201ENST00000619582 524 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 Z69720.2-201ENST00000624755 279 ntBASIC1.82□□□□□ -2.12
CCDC65Q8IXS2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RNU6-655P-201ENST00000362858 107 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 SNORD56.1-201ENST00000362913 68 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RNU6-1210P-201ENST00000363775 107 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RNU6-944P-201ENST00000364023 107 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RNU6-1303P-201ENST00000364841 107 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RNU6-715P-201ENST00000365204 103 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AL049545.1-201ENST00000401856 572 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RAP1BP3-201ENST00000407180 549 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RN7SKP101-201ENST00000411376 320 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 OR9R1P-201ENST00000412200 877 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AL358453.1-201ENST00000422522 250 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 RPS6P15-201ENST00000431996 751 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AL121890.1-201ENST00000435457 205 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 YWHAEP4-201ENST00000505390 198 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AC104136.1-201ENST00000512969 394 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AP002453.2-201ENST00000533503 320 ntBASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC65Q8IXS2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms