Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNU6-11P-201ENST00000364234 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU4-75P-201ENST00000364621 146 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-25P-201ENST00000383873 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-1-201ENST00000383898 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 Y_RNA.409-201ENST00000383990 98 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-48P-201ENST00000384161 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-36P-201ENST00000384172 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-4P-201ENST00000384205 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-5P-201ENST00000384238 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-3P-201ENST00000384314 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-16P-201ENST00000384385 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU1-57P-201ENST00000384491 166 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-15P-201ENST00000384534 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-2-201ENST00000384627 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-29P-201ENST00000384637 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-9-201ENST00000384776 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-33P-201ENST00000384793 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 MIR186-201ENST00000384988 86 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 SNORA46.1-201ENST00000391069 153 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AL606923.1-201ENST00000406616 190 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AC016907.1-201ENST00000419483 435 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 AC008267.5-201ENST00000424928 265 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 FDX1P2-201ENST00000450769 375 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU7-180P-201ENST00000459240 63 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 CKS1BP2-201ENST00000497342 240 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AC010486.1-201ENST00000511793 424 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 MTND3P5-201ENST00000512798 333 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AC008549.1-201ENST00000512900 643 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 SCARNA16.3-201ENST00000516595 184 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SKA3Q8IX90 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 OR11H5P-201ENST00000554039 926 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 PSMA3P-201ENST00000555485 635 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AL133241.1-201ENST00000556832 487 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.89□□□□□ -2.11
SKA3Q8IX90 AC093249.1-201ENST00000567049 203 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AC008749.1-201ENST00000597650 306 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AL713866.2-201ENST00000603579 219 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 RNU6-6P-201ENST00000606623 107 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 uc_338.34-201ENST00000617467 174 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AL158209.2-201ENST00000619266 216 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 AC097372.5-201ENST00000623665 376 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 MIR6863-201ENST00000636112 90 ntBASIC1.89□□□□□ -2.11
SKA3Q8IX90 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SKA3Q8IX90 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SKA3Q8IX90 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SKA3Q8IX90 Y_RNA.255-201ENST00000364581 97 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 Y_RNA.480-201ENST00000384364 102 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 SNORD37.1-201ENST00000390968 65 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 RNU2-63P-201ENST00000410792 194 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 AL135786.1-201ENST00000415892 214 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 AC074117.2-201ENST00000417130 397 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 DNAJC19P4-201ENST00000440115 345 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 AC016691.1-201ENST00000441321 413 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.88□□□□□ -2.11
SKA3Q8IX90 AL163973.1-201ENST00000484753 577 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.88□□□□□ -2.11
SKA3Q8IX90 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.88□□□□□ -2.11
SKA3Q8IX90 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.88□□□□□ -2.11
SKA3Q8IX90 AF213884.2-201ENST00000510417 903 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 SNORA25.17-201ENST00000517184 124 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 AC022880.1-201ENST00000534017 973 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 AP003034.1-201ENST00000534621 422 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 AC023050.3-201ENST00000541142 333 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 MIR4513-201ENST00000581077 86 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 RPL30P11-203ENST00000598995 310 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 AP001330.5-201ENST00000607176 411 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 U2.17-201ENST00000611454 95 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SKA3Q8IX90 AC068792.1-201ENST00000621354 417 ntBASIC1.88□□□□□ -2.11
SKA3Q8IX90 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SKA3Q8IX90 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SKA3Q8IX90 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
SKA3Q8IX90 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.87□□□□□ -2.11
SKA3Q8IX90 Y_RNA.436-201ENST00000384097 102 ntBASIC1.87□□□□□ -2.11
SKA3Q8IX90 MIR17-201ENST00000385012 84 ntBASIC1.87□□□□□ -2.11
SKA3Q8IX90 RNA5SP425-201ENST00000410336 112 ntBASIC1.87□□□□□ -2.11
SKA3Q8IX90 RNU2-23P-201ENST00000410545 195 ntBASIC1.87□□□□□ -2.11
SKA3Q8IX90 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.87□□□□□ -2.11
SKA3Q8IX90 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.87□□□□□ -2.11
SKA3Q8IX90 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
SKA3Q8IX90 RPL7P54-201ENST00000438336 674 ntBASIC1.87□□□□□ -2.11
SKA3Q8IX90 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.87□□□□□ -2.11
SKA3Q8IX90 RPL9P6-201ENST00000492764 598 ntBASIC1.87□□□□□ -2.11
SKA3Q8IX90 CCDC34P1-201ENST00000507441 517 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 255.4 ms