Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 SNORD45.3-201ENST00000363836 72 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 SNORD58C-201ENST00000365223 64 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 RNU6-622P-201ENST00000384272 103 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 CBX3P9-201ENST00000402326 552 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 AC099548.1-201ENST00000421443 426 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 RPS26P2-201ENST00000440331 348 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 SNRPGP8-201ENST00000454064 226 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 NIP7P2-201ENST00000485801 544 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 RPL21P129-201ENST00000491732 478 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 RNA5SP154-201ENST00000516193 111 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 AC015912.2-201ENST00000571053 181 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 MIR3160-1-201ENST00000577972 85 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 MIR4277-201ENST00000578298 84 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 RN7SL690P-201ENST00000582087 240 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 SNORD87-201ENST00000364849 89 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 RNU1-64P-201ENST00000365443 163 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 SNORA70F-201ENST00000384142 135 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 MIR23B-201ENST00000384832 97 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 SNORA12.1-201ENST00000390873 148 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 SNORA57.1-201ENST00000391227 145 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 EI24P2-201ENST00000397776 1076 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 TOMM22P2-201ENST00000430735 237 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 RNA5SP103-201ENST00000459503 118 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 AC107918.3-201ENST00000533272 382 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 AL023881.1-201ENST00000621088 301 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 AC068205.3-201ENST00000636385 468 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 AC002543.1-201ENST00000299783 1954 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 AC018555.1-201ENST00000567548 1980 ntBASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCUBE3Q8IX30 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 ASNSP1-201ENST00000518311 1939 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AC021146.4-201ENST00000309229 279 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 RNU6-884P-201ENST00000363889 107 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 RN7SKP224-201ENST00000364140 325 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 SNORD113.2-201ENST00000364166 89 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 Y_RNA.361-201ENST00000365515 120 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 RNU6-1336P-201ENST00000383886 109 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 RNU6-1197P-201ENST00000391183 107 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 NDUFS5P4-201ENST00000412983 318 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 MLLT10P1-201ENST00000418346 262 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 HSPE1P21-201ENST00000438283 308 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AC006028.1-201ENST00000438379 402 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AC108751.2-201ENST00000469993 231 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AIG1P1-201ENST00000503376 148 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 SNORA70.12-201ENST00000516084 153 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 RNU6-581P-201ENST00000516214 105 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 AC025754.2-201ENST00000606491 432 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 U6.115-201ENST00000636045 103 ntBASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCUBE3Q8IX30 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.64
SCUBE3Q8IX30 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SCUBE3Q8IX30 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SCUBE3Q8IX30 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 SNORA71.2-201ENST00000364941 134 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 RNU6-487P-201ENST00000365430 104 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 MIR548A1-201ENST00000385041 97 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 RNA5SP397-201ENST00000391323 118 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 Y_RNA.617-201ENST00000410920 90 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 Z75741.1-201ENST00000446793 314 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 RN7SL41P-201ENST00000476144 297 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 ARF4P1-201ENST00000605447 541 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 MIR6715B-201ENST00000637172 77 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms