Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC244505.7-201ENST00000599675 272 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 SNORA51-201ENST00000606420 132 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AP000553.6-201ENST00000641242 118 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AL672296.1-201ENST00000427780 2158 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 AC022336.2-201ENST00000568966 2538 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.16-201ENST00000362421 102 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-1301P-201ENST00000362724 104 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 RPS29P4-201ENST00000414733 161 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 AC096920.1-201ENST00000423991 241 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 SSXP4-201ENST00000451349 245 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 HMGN2P16-201ENST00000456802 261 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 AP000870.1-201ENST00000472927 406 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 RPS4XP13-201ENST00000483219 789 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 MIR2355-201ENST00000517199 87 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 AC019159.1-201ENST00000605094 187 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 BRDTP1-201ENST00000605735 677 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 AL391261.4-201ENST00000616012 481 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 SNORA43.4-201ENST00000629559 138 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 AC244205.2-202ENST00000635781 342 ntBASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM48Q8IWZ4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-879P-201ENST00000364328 108 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 SNORA73.2-201ENST00000364946 201 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 SNORA36A-201ENST00000384221 132 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-937P-201ENST00000384325 106 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-843P-201ENST00000384454 104 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.515-201ENST00000384535 112 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.602-201ENST00000410535 92 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 EIF1AXP1-201ENST00000419267 435 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AC005300.1-201ENST00000428401 373 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AL445305.1-201ENST00000432577 575 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AC016700.2-201ENST00000446011 156 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AL590664.1-201ENST00000448065 339 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AC084357.1-201ENST00000473404 255 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-1012P-201ENST00000516606 109 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 SNORA31.23-201ENST00000517219 133 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 CR383656.8-201ENST00000549046 145 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.772-201ENST00000606692 102 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 RMST_6.1-201ENST00000611980 203 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 MIR6075-201ENST00000620782 95 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 AC073308.1-201ENST00000623696 305 ntBASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM48Q8IWZ4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM48Q8IWZ4 AC090740.1-201ENST00000623193 2262 ntBASIC3.59□□□□□ -1.84
TRIM48Q8IWZ4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.59□□□□□ -1.84
TRIM48Q8IWZ4 AC106871.1-201ENST00000568324 3102 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 ADAM3A-203ENST00000461344 2157 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 CEP170P1-201ENST00000502249 4587 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AL391987.6-201ENST00000305671 199 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 RNA5SP51-201ENST00000364750 119 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 RNU6-338P-201ENST00000383888 105 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 RNU6-318P-201ENST00000384283 103 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.518-201ENST00000384552 113 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 MIR7-3-201ENST00000384898 110 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 SNORD78.2-201ENST00000391076 69 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AP000907.1-201ENST00000428428 510 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 BX679664.1-201ENST00000434429 253 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AL358232.1-201ENST00000448030 501 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 HMGN2P10-201ENST00000448085 265 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 SNORD105B-201ENST00000458770 79 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 RPL21P104-201ENST00000464143 478 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AC097462.2-201ENST00000504623 481 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 HSPE1P4-201ENST00000550617 308 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AL391261.3-201ENST00000557194 520 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AC021739.1-201ENST00000559631 174 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 HSPE1P7-201ENST00000604681 321 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AC073657.2-201ENST00000605661 303 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms