Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 AL645944.1-201ENST00000603857 493 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 AC006065.5-201ENST00000623427 349 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 U6.92-201ENST00000636464 89 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 U6.105-201ENST00000637379 88 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VRK3Q8IV63 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VRK3Q8IV63 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VRK3Q8IV63 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VRK3Q8IV63 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VRK3Q8IV63 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VRK3Q8IV63 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VRK3Q8IV63 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VRK3Q8IV63 Y_RNA.405-201ENST00000383979 100 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 Y_RNA.451-201ENST00000384200 100 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 Y_RNA.524-201ENST00000384564 100 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 Y_RNA.561-201ENST00000384694 100 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 MIR183-201ENST00000384958 110 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 Y_RNA.581-201ENST00000391017 97 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 RNA5SP171-201ENST00000391071 115 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 TMEM167AP1-201ENST00000423409 219 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 MTCO3P29-201ENST00000432119 779 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 AL513124.1-201ENST00000450410 614 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 AL138752.1-201ENST00000452964 351 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.3□□□□□ -1.88
VRK3Q8IV63 AL160314.1-201ENST00000490836 438 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 FCF1P8-201ENST00000510322 597 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 AL359273.1-201ENST00000510918 627 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 RNU6-1338P-201ENST00000516328 91 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 AC025755.1-201ENST00000521306 278 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 ATP5F1P5-201ENST00000526403 760 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.3□□□□□ -1.88
VRK3Q8IV63 AC008121.1-201ENST00000603244 268 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 RNVU1-4-201ENST00000612985 164 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 MIR376A1-201ENST00000616574 68 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.3□□□□□ -1.88
VRK3Q8IV63 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.3□□□□□ -1.88
VRK3Q8IV63 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
VRK3Q8IV63 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VRK3Q8IV63 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VRK3Q8IV63 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
VRK3Q8IV63 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.29□□□□□ -1.88
VRK3Q8IV63 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VRK3Q8IV63 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VRK3Q8IV63 AL359693.1-201ENST00000614959 2407 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 RNU6-227P-201ENST00000362865 103 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 Y_RNA.269-201ENST00000364685 89 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 Y_RNA.270-201ENST00000364693 104 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 Y_RNA.358-201ENST00000365491 99 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 AP002088.1-201ENST00000382740 395 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 PTMAP5-201ENST00000393073 333 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.29□□□□□ -1.88
VRK3Q8IV63 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.29□□□□□ -1.88
VRK3Q8IV63 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VRK3Q8IV63 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VRK3Q8IV63 CYCSP35-201ENST00000451978 304 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 SNORD108-201ENST00000459332 71 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.29□□□□□ -1.88
VRK3Q8IV63 RNU6-1212P-201ENST00000517023 104 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 AC093023.1-201ENST00000547375 507 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 MIR3921-201ENST00000577308 85 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 AC090132.2-201ENST00000615881 347 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 AC090617.7-201ENST00000623952 126 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 U6.98-201ENST00000637157 84 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
VRK3Q8IV63 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VRK3Q8IV63 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
VRK3Q8IV63 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
VRK3Q8IV63 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VRK3Q8IV63 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VRK3Q8IV63 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VRK3Q8IV63 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VRK3Q8IV63 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VRK3Q8IV63 AL049781.1-201ENST00000623195 3585 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 RNU1-70P-201ENST00000362618 164 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 Y_RNA.65-201ENST00000362846 100 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 Y_RNA.200-201ENST00000364018 102 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 RNU6-173P-201ENST00000364215 104 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 RNU1-33P-201ENST00000364249 162 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 Y_RNA.277-201ENST00000364754 102 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 RNU6-662P-201ENST00000384253 104 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 Y_RNA.541-201ENST00000384640 113 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 MIR10A-201ENST00000385043 110 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.28□□□□□ -1.88
VRK3Q8IV63 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.28□□□□□ -1.88
VRK3Q8IV63 AC021205.2-201ENST00000480069 347 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms