Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SH3RF1Q7Z6J0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-103P-201ENST00000363686 107 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-793P-201ENST00000384233 104 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 HMGN2P30-201ENST00000423237 256 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AC125238.1-201ENST00000448842 249 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AC026726.1-201ENST00000512859 601 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 RNA5SP49-201ENST00000516450 115 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AC115990.1-201ENST00000526957 301 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 DEFB131C-201ENST00000528817 165 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 CR383656.8-201ENST00000549046 145 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AC090616.3-201ENST00000582184 217 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 TUG1_4.1-201ENST00000619464 181 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 AC140479.6-201ENST00000633535 357 ntBASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SH3RF1Q7Z6J0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 AL136964.1-201ENST00000622038 2990 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-899P-201ENST00000363947 107 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-476P-201ENST00000384726 107 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 MIR325-201ENST00000385260 98 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 RPS26P42-201ENST00000413485 326 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 RPL26P27-201ENST00000414397 437 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 CRYBB2P1-203ENST00000415709 538 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 AC244670.1-201ENST00000436879 112 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 RPL35AP15-201ENST00000468042 339 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 AC006499.6-201ENST00000511169 607 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 MIR4744-201ENST00000581563 82 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 AC069200.1-201ENST00000609511 323 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 MIR6129-201ENST00000616087 109 ntBASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SH3RF1Q7Z6J0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-324P-201ENST00000363957 106 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-147P-201ENST00000383983 107 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-578P-201ENST00000390980 103 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 RNU6-381P-201ENST00000391259 108 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 RPL21P65-201ENST00000406094 466 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 MIR320B2-201ENST00000408479 138 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AL160275.2-201ENST00000412010 394 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AC012306.1-201ENST00000423267 114 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AL445584.1-201ENST00000431451 330 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 RPL23AP83-201ENST00000434984 473 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 Y_RNA.637-201ENST00000459424 114 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AC022616.8-201ENST00000533569 253 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 CYP4A43P-201ENST00000568156 121 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 MIR3944-201ENST00000581277 108 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AL161756.2-201ENST00000604597 246 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 MIR432-201ENST00000606207 94 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AL591926.4-201ENST00000616895 298 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 MIR3674-201ENST00000636576 68 ntBASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF1Q7Z6J0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms