Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC096920.1-201ENST00000423991 241 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 RPL7P46-201ENST00000425129 740 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AL031274.1-201ENST00000450334 232 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 HMGN3P1-201ENST00000453847 193 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 SCARNA18-201ENST00000459004 134 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 RPL17P19-201ENST00000489069 552 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 RPL7P23-201ENST00000493874 747 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 CYCTP-201ENST00000504253 315 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-1219P-201ENST00000516143 112 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 SCARNA24.2-201ENST00000516968 130 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 RN7SKP289-201ENST00000517244 295 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AP000907.2-201ENST00000530827 353 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC092470.1-201ENST00000546187 132 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC009127.3-201ENST00000570531 403 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC005899.2-201ENST00000584353 90 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC006254.2-201ENST00000603259 279 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AL033523.1-201ENST00000605153 153 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC007619.2-201ENST00000605743 379 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 TUG1_4.1-201ENST00000619464 181 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 AC048347.1-201ENST00000624621 427 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BHLHA9Q7RTU4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 SNORD81.1-201ENST00000363064 77 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 SNORD6-201ENST00000365444 73 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-429P-201ENST00000384582 108 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 SNORA16.2-201ENST00000390991 127 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 Y_RNA.580-201ENST00000391004 95 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 U3.42-201ENST00000408746 214 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AC096632.1-201ENST00000427395 310 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AC125238.1-201ENST00000448842 249 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AC108059.3-201ENST00000456388 214 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AC026410.2-201ENST00000460281 156 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 SNORA14.1-201ENST00000516113 141 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-426P-201ENST00000516464 97 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AC025423.5-201ENST00000550230 219 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 MIR4300-201ENST00000581016 96 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AL353997.4-201ENST00000586196 166 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AL670379.6-201ENST00000603753 252 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AL670379.1-201ENST00000604752 252 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AL670379.2-201ENST00000604983 252 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AL670379.5-201ENST00000605253 252 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AL670379.8-201ENST00000605353 252 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AL670379.7-201ENST00000605823 252 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 AF127577.6-201ENST00000623352 2191 ntBASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BHLHA9Q7RTU4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-600P-201ENST00000362524 99 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 Y_RNA.127-201ENST00000363386 109 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 RNU1-140P-201ENST00000365040 165 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-898P-201ENST00000365627 104 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 SNORD116-18-201ENST00000383961 92 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-128P-201ENST00000383976 107 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 Y_RNA.458-201ENST00000384240 102 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 SNORA24.1-201ENST00000384401 135 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 MIR186-201ENST00000384988 86 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 MT-TC-201ENST00000387405 66 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 Z92545.1-201ENST00000411782 234 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 FTH1P1-201ENST00000437933 532 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 RNU7-187P-201ENST00000458985 68 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-1333P-201ENST00000516162 93 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 MIR5047-201ENST00000579212 100 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 AC011471.1-201ENST00000585766 187 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 AC093732.2-201ENST00000607950 274 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 AC006023.2-201ENST00000609916 167 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 AC012531.5-201ENST00000611375 151 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 MIR1244-1-201ENST00000612829 85 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 MIR1244-3-201ENST00000635744 85 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 MIR1244-2-201ENST00000636449 85 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 MIR1244-4-202ENST00000636813 85 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 U6.101-201ENST00000637707 76 ntBASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms