Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.65□□□□□ -1.99
SHFQ7M4L6 AC109446.1-201ENST00000566172 220 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 MIR5680-201ENST00000577577 84 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 MIR5690-201ENST00000583739 73 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 AC078795.3-201ENST00000602913 472 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 AL355877.2-201ENST00000603670 358 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 AP001836.1-201ENST00000604675 523 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 AC019159.1-201ENST00000605094 187 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 AC018889.1-201ENST00000605372 397 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 MIR8076-201ENST00000611401 83 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SHFQ7M4L6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHFQ7M4L6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHFQ7M4L6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 MAPK10-266ENST00000641066 6555 ntBASIC2.65□□□□□ -1.99
SHFQ7M4L6 HAUS6P2-201ENST00000433254 2404 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHFQ7M4L6 RNU4-76P-201ENST00000364509 141 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 RNU1-140P-201ENST00000365040 165 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 RNU6-487P-201ENST00000365430 104 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 MIR521-1-201ENST00000384902 87 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 MIR183-201ENST00000384958 110 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 Y_RNA.579-201ENST00000390939 94 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AL133475.1-201ENST00000404414 305 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AL590004.2-201ENST00000404787 371 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 RNU6-174P-201ENST00000410406 106 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 AL031659.1-201ENST00000447075 539 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 ELOCP24-201ENST00000456370 334 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC107626.1-201ENST00000471084 183 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC097462.2-201ENST00000504623 481 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC005741.1-201ENST00000511094 432 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 RNA5SP384-201ENST00000516615 116 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 MIR3158-1-201ENST00000583596 81 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 PISRT1.1-201ENST00000616930 107 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 MIR7975-201ENST00000619350 68 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AC024581.2-201ENST00000619986 252 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 U6.105-201ENST00000637379 88 ntBASIC2.64□□□□□ -1.99
SHFQ7M4L6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SHFQ7M4L6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.64□□□□□ -1.99
SHFQ7M4L6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SHFQ7M4L6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHFQ7M4L6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHFQ7M4L6 RNU6-227P-201ENST00000362865 103 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 RNU6-596P-201ENST00000365395 98 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 Y_RNA.431-201ENST00000384086 102 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 RNU6-43P-201ENST00000384302 107 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 AP000275.1-201ENST00000411943 390 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.63□□□□□ -1.99
SHFQ7M4L6 AC005326.1-201ENST00000429197 123 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.63□□□□□ -1.99
SHFQ7M4L6 RPL30P15-201ENST00000457129 321 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 RN7SL601P-201ENST00000471221 293 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 GZMAP1-201ENST00000503054 631 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 AC097473.1-201ENST00000508142 408 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 ACA59.1-201ENST00000515966 143 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 CKS1BP7-201ENST00000522230 235 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHFQ7M4L6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.63□□□□□ -1.99
SHFQ7M4L6 AC090897.2-201ENST00000581715 130 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 AC044792.1-201ENST00000593294 196 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 BNIP3P22-201ENST00000593399 556 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.63□□□□□ -1.99
SHFQ7M4L6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.63□□□□□ -1.99
SHFQ7M4L6 UCA1.1-201ENST00000620952 75 ntBASIC2.63□□□□□ -1.99
SHFQ7M4L6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHFQ7M4L6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.63□□□□□ -1.99
SHFQ7M4L6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHFQ7M4L6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHFQ7M4L6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHFQ7M4L6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHFQ7M4L6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHFQ7M4L6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHFQ7M4L6 Y_RNA.2-201ENST00000362330 96 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 SNORA63.1-201ENST00000362493 131 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 RNU1-35P-201ENST00000362782 153 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 RNA5SP139-201ENST00000364340 117 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 RNU6-1027P-201ENST00000383998 107 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 RNU6-331P-201ENST00000384724 107 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 MIR544A-201ENST00000384855 91 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 MIR147B-201ENST00000390185 80 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 USMG5P1-201ENST00000425964 177 ntBASIC2.62□□□□□ -1.99
SHFQ7M4L6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.62□□□□□ -1.99
SHFQ7M4L6 AC124916.1-201ENST00000444020 547 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms