Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-704P-201ENST00000364162 103 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 RNY4P28-201ENST00000365281 93 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-395P-201ENST00000365662 106 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 SNORA48.5-201ENST00000391143 135 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AC011742.1-201ENST00000431448 434 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 HSPE1P25-201ENST00000455484 251 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 U3.44-201ENST00000458938 192 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AC087588.1-201ENST00000462203 316 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AL049873.1-201ENST00000480540 376 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 TRBV12-2-201ENST00000489763 344 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AC093663.1-201ENST00000497190 394 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 SNORA70.16-201ENST00000516390 95 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-612P-201ENST00000516909 102 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AC104581.2-201ENST00000572227 430 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AC011476.5-201ENST00000615594 130 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 AL590240.4-201ENST00000616908 390 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 U4.6-201ENST00000621618 127 ntBASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CNKSR3Q6P9H4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 RNY1P5-201ENST00000383890 115 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 MIR514A1-201ENST00000385133 98 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 MIR613-201ENST00000385248 95 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 MIR301A-201ENST00000385261 86 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 AL513331.1-201ENST00000411908 397 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 NDUFB4P10-201ENST00000452541 359 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 HMGN2P16-201ENST00000456802 261 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 RPL7P47-201ENST00000497299 556 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 SNORD116-28-201ENST00000516123 91 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 AC084851.1-201ENST00000529105 249 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 Z83818.1-201ENST00000603584 150 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 BRDTP1-201ENST00000605735 677 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 OR4G2P-202ENST00000641004 1759 ntBASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.86□□□□□ -1.79
CNKSR3Q6P9H4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-858P-201ENST00000362436 107 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 SNORD14B-201ENST00000364533 90 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-290P-201ENST00000365212 101 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-651P-201ENST00000411040 105 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 AP001486.1-201ENST00000463339 476 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 AC109925.1-201ENST00000478069 331 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 SEPT14P8-201ENST00000508026 178 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 RNU7-200P-201ENST00000516105 62 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 MTND5P41-201ENST00000517498 206 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 CASP1P1-201ENST00000526345 212 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 MIR4659A-201ENST00000580269 81 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 AL161798.1-201ENST00000604630 131 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 AL161629.2-201ENST00000615347 275 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 AC090617.7-201ENST00000623952 126 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.85□□□□□ -1.79
CNKSR3Q6P9H4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 AC008568.2-201ENST00000623862 2313 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.44-201ENST00000362676 108 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-428P-201ENST00000362942 107 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 AL590383.1-201ENST00000428602 75 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 AL591043.1-201ENST00000432461 424 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 ANXA2P1-201ENST00000505539 926 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms