Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 Z98749.2-208ENST00000381646 500 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RNU6-1062P-201ENST00000383908 107 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RNU1-73P-201ENST00000383971 164 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RNU6-658P-201ENST00000384606 106 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 MIR493-201ENST00000385254 89 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 MIR325-201ENST00000385260 98 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 MIR888-201ENST00000401186 77 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 NDUFB1P1-201ENST00000435191 180 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RN7SKP209-201ENST00000516888 304 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RN7SKP289-201ENST00000517244 295 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 IGKV2-26-201ENST00000518305 343 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 AC073410.2-201ENST00000603240 332 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 BRDTP1-201ENST00000605735 677 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RPL23AP88-201ENST00000605759 454 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 BX284668.6-201ENST00000606899 438 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 AC024581.2-201ENST00000619986 252 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 AC241585.2-209ENST00000638217 143 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AL353743.1-202ENST00000431724 1695 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 RNU6-942P-201ENST00000363002 107 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 Y_RNA.581-201ENST00000391017 97 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AC098831.1-201ENST00000440661 216 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AC009296.1-201ENST00000443146 155 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 RPS26P21-201ENST00000475397 348 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 RPL23AP75-201ENST00000491601 451 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 RN7SL504P-201ENST00000494496 287 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 HMGB3P17-201ENST00000504195 649 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 RNU4-71P-201ENST00000516258 113 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 AC240442.1-201ENST00000616055 283 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 MIR6852-201ENST00000621699 66 ntBASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USPL1Q5W0Q7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 RNA5SP374-201ENST00000362939 125 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 SNORD27-201ENST00000363981 72 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 RNU6-142P-201ENST00000384019 107 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 U3.19-201ENST00000390893 196 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 NDUFS5P4-201ENST00000412983 318 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 FTH1P6-201ENST00000430768 320 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AL353705.4-201ENST00000449661 238 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 HMGB3P8-201ENST00000449709 577 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 RPL23AP14-201ENST00000468281 468 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AC136932.1-201ENST00000574771 208 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 MIR6134-201ENST00000617606 109 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AC137590.2-201ENST00000619709 240 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 FAM35DP-201ENST00000323387 2712 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 AP001148.1-201ENST00000624124 2359 ntBASIC4.47□□□□□ -1.69
USPL1Q5W0Q7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
USPL1Q5W0Q7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
USPL1Q5W0Q7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 AC007656.2-201ENST00000624902 4547 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 RNU6-1301P-201ENST00000362724 104 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 MIR153-2-201ENST00000385225 87 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 AC017079.2-201ENST00000416102 485 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 TOMM22P6-201ENST00000465035 409 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 RNU6-1338P-201ENST00000516328 91 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 AC022080.3-201ENST00000544433 482 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 CR383656.8-201ENST00000549046 145 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 RRN3P3-201ENST00000549207 578 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 H3F3AP1-201ENST00000559984 334 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 MIR3690-201ENST00000580266 75 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 AC010928.2-201ENST00000588017 287 ntBASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms