Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 Y_RNA.525-201ENST00000384570 113 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 MIR183-201ENST00000384958 110 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 MIR487A-201ENST00000385009 80 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 RNU6-837P-201ENST00000391056 108 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 SNORD37.2-201ENST00000391075 66 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 MTHFD2P2-201ENST00000407725 247 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 RNU6-1199P-201ENST00000411249 104 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 AL590399.6-201ENST00000446396 307 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 AC110768.1-201ENST00000509222 400 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 RNU5E-3P-201ENST00000515913 68 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 Y_RNA.712-201ENST00000517011 92 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 AC021269.2-201ENST00000532318 330 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 AC005086.4-201ENST00000623065 213 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
RC3H1Q5TC82 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
RC3H1Q5TC82 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC073346.2-201ENST00000624724 2058 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 SNORD115-8-201ENST00000363856 82 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 SNORD115-38-201ENST00000365037 82 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 ANP32BP2-201ENST00000454525 545 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 RPS20P22-201ENST00000473700 357 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 UBE2CP3-201ENST00000502715 450 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 SCARNA14-201ENST00000516903 136 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC090281.1-201ENST00000523019 276 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC016256.1-201ENST00000547971 354 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC090049.2-201ENST00000550377 109 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC023043.3-201ENST00000593113 385 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 AC004467.1-201ENST00000615678 330 ntBASIC5.08□□□□□ -1.6
RC3H1Q5TC82 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.08□□□□□ -1.6
RC3H1Q5TC82 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 AC018529.3-201ENST00000624212 2254 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 RNU6-763P-201ENST00000390865 106 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 U3.19-201ENST00000390893 196 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 RNU6-460P-201ENST00000391158 108 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 AL358075.3-201ENST00000426289 226 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 AC243964.1-201ENST00000441814 261 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 U8.19-201ENST00000459095 133 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 RNU6-625P-201ENST00000459412 107 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 AL133162.1-201ENST00000463228 453 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 AC092991.1-201ENST00000477176 376 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 RNU6-155P-201ENST00000516347 100 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 Y_RNA.694-201ENST00000516677 117 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 LARP7P3-201ENST00000579888 337 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 MIR3200-201ENST00000580767 85 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 MIR432-201ENST00000606207 94 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 AC010999.1-201ENST00000611856 324 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.07□□□□□ -1.6
RC3H1Q5TC82 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
RC3H1Q5TC82 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RC3H1Q5TC82 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RC3H1Q5TC82 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RC3H1Q5TC82 RNA5SP399-201ENST00000364003 117 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 snoU2_19.4-201ENST00000364329 80 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 AC138623.1-201ENST00000418060 216 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 NDUFB4P7-201ENST00000423198 363 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 HMGN2P31-201ENST00000432430 273 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 SNORA74D-201ENST00000516404 141 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 RNA5SP290-201ENST00000517133 127 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 CYCSP23-201ENST00000519781 313 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 IGKV2D-19-201ENST00000523346 262 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 AP001328.1-201ENST00000528550 176 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 AC109810.1-201ENST00000534066 224 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 AC018448.1-201ENST00000552843 316 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 AL121603.1-201ENST00000553815 142 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 MIR5582-201ENST00000579697 68 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 AL138721.1-201ENST00000616756 179 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 AL591926.4-201ENST00000616895 298 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms