Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CKS1BP7-201ENST00000522230 235 ntBASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 AC020895.1-201ENST00000595362 272 ntBASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 AL137843.1-201ENST00000605078 385 ntBASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 AC090132.2-201ENST00000615881 347 ntBASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 LINC00901.1-201ENST00000617252 152 ntBASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 AC118273.1-201ENST00000525324 3006 ntBASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNFT1Q5M7Z0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 U3.15-201ENST00000365398 212 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 CKS1BP5-201ENST00000434172 273 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 H2AFZP5-201ENST00000446960 382 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 AC006517.1-201ENST00000480485 328 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 MRPS36P2-201ENST00000512569 299 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 AP003730.1-201ENST00000524605 285 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 AC006349.1-201ENST00000555526 235 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 AC136601.2-201ENST00000604356 474 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 AL356218.2-201ENST00000605264 187 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 RNU6-94P-201ENST00000607728 107 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 RMST_8.1-201ENST00000610287 165 ntBASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.24□□□□□ -1.73
RNFT1Q5M7Z0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AC021146.4-201ENST00000309229 279 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 RNU6-1014P-201ENST00000383940 103 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 RNY1P7-201ENST00000384743 110 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 MIR659-201ENST00000384963 97 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 TOMM22P2-201ENST00000430735 237 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 RPL35AP21-201ENST00000437667 333 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 TDGF1P1-201ENST00000445734 527 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AL645939.1-201ENST00000453429 797 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AC009963.2-201ENST00000453431 138 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AC010469.1-201ENST00000463864 576 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 S100A11P1-201ENST00000477525 312 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 SNORA70.12-201ENST00000516084 153 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 RNA5SP395-201ENST00000516567 118 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 RNU6-158P-201ENST00000517104 100 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AC025754.2-201ENST00000606491 432 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 MIR548AY-201ENST00000617669 107 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AC015914.2-201ENST00000618167 288 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 U3.53-201ENST00000628922 216 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AL356489.2-201ENST00000566968 3528 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 OR14L1P-202ENST00000641545 3009 ntBASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNFT1Q5M7Z0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 ADAM3A-203ENST00000461344 2157 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 Y_RNA.323-201ENST00000365157 109 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 UBBP2-201ENST00000376781 231 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 Y_RNA.432-201ENST00000384087 111 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms