Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1EQ15878 AC013267.1-201ENST00000458227 267 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 AL133373.1-201ENST00000497098 94 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CACNA1EQ15878 RNU4-77P-201ENST00000516692 156 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 RNU6-902P-201ENST00000517212 91 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 AC109329.1-201ENST00000518744 317 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1EQ15878 AC026271.5-201ENST00000577873 130 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 AC126365.2-201ENST00000580630 379 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 MIR4305-201ENST00000583252 102 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 MIR3136-201ENST00000583498 78 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.41□□□□□ -2.34
CACNA1EQ15878 AC253576.2-201ENST00000618815 580 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 AL356596.1-201ENST00000624230 379 ntBASIC0.41□□□□□ -2.34
CACNA1EQ15878 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CACNA1EQ15878 Y_RNA.142-201ENST00000363491 102 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 RNU6-777P-201ENST00000364265 104 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.4□□□□□ -2.35
CACNA1EQ15878 RPS3AP37-201ENST00000419176 745 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.4□□□□□ -2.35
CACNA1EQ15878 UBE2D3P3-201ENST00000426992 425 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 MTND4P25-201ENST00000441039 533 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1EQ15878 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1EQ15878 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 RNU6-927P-201ENST00000516199 100 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 SCARNA16.2-201ENST00000516520 172 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 RNU6-1315P-201ENST00000517187 99 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 RNA5SP437-201ENST00000517249 129 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.4□□□□□ -2.35
CACNA1EQ15878 AL157871.3-201ENST00000557231 293 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 AL132657.2-201ENST00000564417 358 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 RPL21P136-201ENST00000605378 396 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 AC004908.3-201ENST00000610248 625 ntBASIC0.4□□□□□ -2.35
CACNA1EQ15878 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.4□□□□□ -2.35
CACNA1EQ15878 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1EQ15878 Y_RNA.170-201ENST00000363746 110 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNY3P13-201ENST00000365542 102 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 MIR608-201ENST00000384820 100 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CACNA1EQ15878 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CACNA1EQ15878 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNU2-62P-201ENST00000410868 191 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AL031779.1-201ENST00000415663 330 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 HMGB1P30-201ENST00000492455 606 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC091163.3-201ENST00000518269 1144 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC090115.3-201ENST00000553218 849 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 SNRPGP17-201ENST00000603780 214 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC011451.2-201ENST00000604303 598 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 MZT1P2-201ENST00000604387 248 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC012409.4-201ENST00000612923 249 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 SCARNA4-202ENST00000625402 129 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 ZNF680P1-201ENST00000436625 1469 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC092125.1-201ENST00000562568 1995 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNA5SP493-201ENST00000364115 91 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNU6-353P-201ENST00000364266 108 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 SNORA72.2-201ENST00000365028 127 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNU6-744P-201ENST00000365557 107 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNU6-354P-201ENST00000383862 107 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNU6-1316P-201ENST00000384242 108 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNU6-610P-201ENST00000384264 107 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNU6-43P-201ENST00000384302 107 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 MIR1267-201ENST00000408723 78 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 BTF3P8-201ENST00000414577 526 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AL158050.1-201ENST00000416077 457 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 USP9YP25-201ENST00000457708 443 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 MTND1P16-201ENST00000465177 898 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 RNA5SP216-201ENST00000516111 123 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 SNORD116-28-201ENST00000516123 91 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 Y_RNA.700-201ENST00000516806 100 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC079598.5-201ENST00000547460 117 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC090615.1-201ENST00000577519 154 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AL353997.4-201ENST00000586196 166 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AL022154.1-201ENST00000604698 785 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC004492.1-201ENST00000607036 742 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC098614.4-201ENST00000607601 462 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.39□□□□□ -2.35
CACNA1EQ15878 uc_338.17-201ENST00000619633 179 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 AC120349.2-201ENST00000625002 298 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 MTND1P37-201ENST00000636562 264 ntBASIC0.39□□□□□ -2.35
CACNA1EQ15878 HSBP1P2-201ENST00000299671 229 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU6-1164P-201ENST00000364428 107 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU6-923P-201ENST00000364753 107 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 SNORD116-23-201ENST00000384645 92 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms