Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 EPS15P1-201ENST00000448836 336 ntBASIC1.75□□□□□ -2.13
CCNA1P78396 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CCNA1P78396 snoU13.14-201ENST00000459372 104 ntBASIC1.75□□□□□ -2.13
CCNA1P78396 FAM206BP-201ENST00000510179 541 ntBASIC1.75□□□□□ -2.13
CCNA1P78396 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.75□□□□□ -2.13
CCNA1P78396 AC012360.2-201ENST00000609349 391 ntBASIC1.75□□□□□ -2.13
CCNA1P78396 AC004223.4-201ENST00000612426 332 ntBASIC1.75□□□□□ -2.13
CCNA1P78396 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CCNA1P78396 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CCNA1P78396 OR4G2P-201ENST00000328113 903 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 RNU6-234P-201ENST00000365229 104 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CCNA1P78396 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CCNA1P78396 BTF3L4P2-201ENST00000392798 346 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AC010099.3-201ENST00000423896 409 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AC119618.1-201ENST00000434191 222 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AL512286.1-201ENST00000439244 400 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 TOMM22P6-201ENST00000465035 409 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 RNU7-51P-201ENST00000516560 62 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 Y_RNA.689-201ENST00000516589 107 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.74□□□□□ -2.13
CCNA1P78396 AP005660.1-201ENST00000522972 293 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
CCNA1P78396 AP003122.4-201ENST00000530980 758 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.74□□□□□ -2.13
CCNA1P78396 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.74□□□□□ -2.13
CCNA1P78396 AC009094.1-201ENST00000564443 426 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 CLIC4P2-201ENST00000601934 717 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AL138889.2-201ENST00000603883 242 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AC004908.3-201ENST00000610248 625 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AL157834.3-201ENST00000615543 103 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 AC131159.1-201ENST00000621854 213 ntBASIC1.74□□□□□ -2.13
CCNA1P78396 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCNA1P78396 CBX3P1-201ENST00000325243 554 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 RNU6-942P-201ENST00000363002 107 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 Y_RNA.99-201ENST00000363138 105 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 SNORA75B-201ENST00000384053 137 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 MIR518E-201ENST00000385252 88 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 SNORD115.1-201ENST00000391109 76 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 Y_RNA.608-201ENST00000410647 95 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.73□□□□□ -2.13
CCNA1P78396 RPL23AP30-201ENST00000432419 501 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 AP000797.1-201ENST00000478870 387 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 AC010587.1-201ENST00000505809 469 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
CCNA1P78396 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.73□□□□□ -2.13
CCNA1P78396 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.73□□□□□ -2.13
CCNA1P78396 AC025678.1-201ENST00000567861 338 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.73□□□□□ -2.13
CCNA1P78396 WISP1-OT1-201ENST00000602893 642 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 AL031775.1-201ENST00000607014 887 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 Z82243.1-201ENST00000609432 473 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.73□□□□□ -2.13
CCNA1P78396 AC027807.2-201ENST00000616099 408 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 MIR7844-201ENST00000616161 122 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 AC092140.2-201ENST00000618027 521 ntBASIC1.73□□□□□ -2.13
CCNA1P78396 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
CCNA1P78396 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCNA1P78396 SNORD3E-201ENST00000362899 217 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 SNORD56.2-201ENST00000363242 71 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 Y_RNA.116-201ENST00000363292 103 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 RNU4-1-201ENST00000363925 141 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 Y_RNA.355-201ENST00000365462 98 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.72□□□□□ -2.13
CCNA1P78396 RNU6-39P-201ENST00000384344 107 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 RNA5SP501-201ENST00000410990 112 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 MTND2P9-201ENST00000422293 931 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 NDUFA5P4-201ENST00000436704 385 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.72□□□□□ -2.13
CCNA1P78396 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.72□□□□□ -2.13
CCNA1P78396 RNU6-1129P-201ENST00000515964 104 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 RNU6-970P-201ENST00000516312 107 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 AC135279.1-201ENST00000543493 504 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.72□□□□□ -2.13
CCNA1P78396 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.72□□□□□ -2.13
CCNA1P78396 AC010928.2-201ENST00000588017 287 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 AL359999.1-201ENST00000604513 294 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 AP002360.4-201ENST00000606980 481 ntBASIC1.72□□□□□ -2.13
CCNA1P78396 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
CCNA1P78396 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
CCNA1P78396 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.72□□□□□ -2.13
CCNA1P78396 ZNF680P1-201ENST00000436625 1469 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 MIR126-201ENST00000362291 85 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 RNU6-212P-201ENST00000362642 104 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 Y_RNA.118-201ENST00000363300 101 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 RNU4-13P-201ENST00000364019 141 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 Y_RNA.796-201ENST00000364268 102 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 Y_RNA.799-201ENST00000364992 102 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 SNORD116-20-201ENST00000384529 92 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 OR9R1P-201ENST00000412200 877 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 AL590556.1-201ENST00000423231 483 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.71□□□□□ -2.14
CCNA1P78396 AL356583.2-201ENST00000426536 280 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 CBX3P6-201ENST00000430257 527 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.71□□□□□ -2.14
CCNA1P78396 AC022880.1-201ENST00000534017 973 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 ZNF321P-202ENST00000550843 495 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms