Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC123900.1-201ENST00000420390 96 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.83□□□□□ -2.28
SPCS3P61009 AL122001.1-201ENST00000457027 370 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.83□□□□□ -2.28
SPCS3P61009 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SPCS3P61009 AL157834.3-201ENST00000615543 103 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 AC126544.2-201ENST00000625174 749 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SPCS3P61009 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SPCS3P61009 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SPCS3P61009 MIR340-201ENST00000362125 95 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 Y_RNA.192-201ENST00000363977 102 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 RNU6-960P-201ENST00000364056 120 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 RNU6-968P-201ENST00000384076 107 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.82□□□□□ -2.28
SPCS3P61009 TXNL1P1-201ENST00000429528 554 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 RPS6P15-201ENST00000431996 751 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AC007327.1-201ENST00000447461 264 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AC134050.1-201ENST00000495088 933 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AC005741.1-201ENST00000511094 432 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AC112198.4-201ENST00000515450 351 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 MIR449C-201ENST00000516047 92 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.82□□□□□ -2.28
SPCS3P61009 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.82□□□□□ -2.28
SPCS3P61009 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.82□□□□□ -2.28
SPCS3P61009 AL512310.8-201ENST00000550183 120 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 MIR544B-201ENST00000582372 78 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AL391646.1-201ENST00000603860 190 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 MZT1P2-201ENST00000604387 248 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 RNU6-88P-201ENST00000606801 100 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AL391813.2-201ENST00000609113 322 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 AP000943.4-201ENST00000622912 357 ntBASIC0.82□□□□□ -2.28
SPCS3P61009 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SPCS3P61009 AC010615.1-201ENST00000594254 1764 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 RNU6-413P-201ENST00000384115 107 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 RPS3AP36-201ENST00000398190 775 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 RNU2-7P-201ENST00000410794 178 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.81□□□□□ -2.28
SPCS3P61009 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.81□□□□□ -2.28
SPCS3P61009 POLR2J4-204ENST00000418424 324 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 RPS15AP12-201ENST00000419498 388 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 AC245047.4-201ENST00000433189 144 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.81□□□□□ -2.28
SPCS3P61009 AL121890.1-201ENST00000435457 205 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SPCS3P61009 RNA5SP481-201ENST00000516814 122 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 SNORD60.2-201ENST00000516883 86 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 SUMO2P18-201ENST00000518873 252 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.81□□□□□ -2.28
SPCS3P61009 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.81□□□□□ -2.28
SPCS3P61009 MIR3146-201ENST00000580367 79 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.81□□□□□ -2.28
SPCS3P61009 AC069114.2-201ENST00000604699 304 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 AC072039.2-201ENST00000608883 439 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 U6.42-201ENST00000618440 107 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 AC027335.2-201ENST00000624030 375 ntBASIC0.81□□□□□ -2.28
SPCS3P61009 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
SPCS3P61009 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
SPCS3P61009 RNA5SP213-201ENST00000391031 106 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 SNORA17.3-201ENST00000391159 129 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 MIR1261-201ENST00000408659 82 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 SNRPEP10-201ENST00000420249 274 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 AC013410.2-201ENST00000422627 201 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 MTND4P20-201ENST00000424125 869 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 AL591806.2-201ENST00000433122 173 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.8□□□□□ -2.28
SPCS3P61009 AL008629.1-201ENST00000438615 184 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 AC132479.1-201ENST00000449160 144 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 AC087343.1-201ENST00000477341 475 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.8□□□□□ -2.28
SPCS3P61009 AL163195.1-201ENST00000496941 348 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 RNU5A-4P-201ENST00000516588 111 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.8□□□□□ -2.28
SPCS3P61009 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.8□□□□□ -2.28
SPCS3P61009 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.8□□□□□ -2.28
SPCS3P61009 AC018889.1-201ENST00000605372 397 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 MIR6078-201ENST00000611069 100 ntBASIC0.8□□□□□ -2.28
SPCS3P61009 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.8□□□□□ -2.28
SPCS3P61009 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.79□□□□□ -2.28
SPCS3P61009 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 SNORA25-201ENST00000384384 134 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 MIR194-1-201ENST00000384892 85 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 SNORA11.2-201ENST00000408318 127 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 RPL21P90-201ENST00000415692 466 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 SNX2P2-201ENST00000424553 323 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 RPL23AP30-201ENST00000432419 501 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 AC007969.2-201ENST00000441891 191 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.79□□□□□ -2.28
SPCS3P61009 AC079140.3-201ENST00000511111 550 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 RNU5F-2P-201ENST00000516066 82 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.79□□□□□ -2.28
SPCS3P61009 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.79□□□□□ -2.28
SPCS3P61009 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.79□□□□□ -2.28
SPCS3P61009 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.79□□□□□ -2.28
SPCS3P61009 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
SPCS3P61009 AL020996.3-201ENST00000606617 222 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms