Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC141273.2-201ENST00000618989 130 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA1P56159 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
GFRA1P56159 AL353746.1-201ENST00000566293 6881 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
GFRA1P56159 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GFRA1P56159 MIR335-201ENST00000362173 94 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 RNU6-1010P-201ENST00000362757 107 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 Y_RNA.515-201ENST00000384535 112 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 MIR3074-201ENST00000384885 81 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 MIR513A2-201ENST00000385249 127 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 Y_RNA.581-201ENST00000391017 97 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 HLFP1-201ENST00000402375 499 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 RNU2-20P-201ENST00000410425 191 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 Y_RNA.602-201ENST00000410535 92 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 RNU6-1001P-201ENST00000411265 100 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 RAC1P3-201ENST00000416129 580 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 AL445305.1-201ENST00000432577 575 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.56□□□□□ -1.84
GFRA1P56159 RPS29P7-201ENST00000439662 171 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 AP000705.1-201ENST00000454567 350 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.56□□□□□ -1.84
GFRA1P56159 CYP4A27P-201ENST00000567218 190 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 AL391813.1-201ENST00000603098 260 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 AC073657.2-201ENST00000605661 303 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 AL773545.4-201ENST00000637262 310 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 AL513478.4-201ENST00000641636 310 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
GFRA1P56159 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.56□□□□□ -1.84
GFRA1P56159 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
GFRA1P56159 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GFRA1P56159 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.55□□□□□ -1.84
GFRA1P56159 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA1P56159 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA1P56159 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA1P56159 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.55□□□□□ -1.84
GFRA1P56159 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA1P56159 RNU1-105P-201ENST00000363470 161 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 SNORD113-8-201ENST00000363497 74 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 MIR767-201ENST00000390228 109 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 SNORA11-201ENST00000408789 128 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.55□□□□□ -1.84
GFRA1P56159 HMGN2P20-201ENST00000437531 273 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 AC004383.1-201ENST00000438135 289 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.55□□□□□ -1.84
GFRA1P56159 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.55□□□□□ -1.84
GFRA1P56159 RPS23P5-201ENST00000495419 428 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.55□□□□□ -1.84
GFRA1P56159 MTND1P19-201ENST00000511780 315 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 Y_RNA.673-201ENST00000516306 88 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 DEFB108E-201ENST00000524692 240 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 GNRHR2P1-201ENST00000555315 631 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 MIR4474-201ENST00000579189 78 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 AL354798.1-201ENST00000622505 329 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.55□□□□□ -1.84
GFRA1P56159 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
GFRA1P56159 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.55□□□□□ -1.84
GFRA1P56159 AC008725.1-201ENST00000605123 2263 ntBASIC3.55□□□□□ -1.84
GFRA1P56159 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA1P56159 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA1P56159 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.55□□□□□ -1.84
GFRA1P56159 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA1P56159 AL079305.1-201ENST00000623159 3008 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA1P56159 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA1P56159 AC106871.1-201ENST00000568324 3102 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA1P56159 RNU6-873P-201ENST00000363833 107 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 Y_RNA.237-201ENST00000364439 102 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 Y_RNA.416-201ENST00000384014 113 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 SNORD63-201ENST00000384262 68 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GFRA1P56159 MIR208B-201ENST00000401172 77 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.54□□□□□ -1.84
GFRA1P56159 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.54□□□□□ -1.84
GFRA1P56159 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.54□□□□□ -1.84
GFRA1P56159 RNU5F-2P-201ENST00000516066 82 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 RNU6-1338P-201ENST00000516328 91 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.54□□□□□ -1.84
GFRA1P56159 AP006245.1-201ENST00000522549 120 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.54□□□□□ -1.84
GFRA1P56159 MIR5685-201ENST00000579080 79 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.54□□□□□ -1.84
GFRA1P56159 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.54□□□□□ -1.84
GFRA1P56159 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.54□□□□□ -1.84
GFRA1P56159 AL162713.1-201ENST00000604480 262 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 AL034555.1-201ENST00000604816 211 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 AC069200.1-201ENST00000609511 323 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.54□□□□□ -1.84
GFRA1P56159 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
GFRA1P56159 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GFRA1P56159 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.54□□□□□ -1.84
GFRA1P56159 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.54□□□□□ -1.84
GFRA1P56159 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.54□□□□□ -1.84
GFRA1P56159 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA1P56159 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA1P56159 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA1P56159 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms