Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH13P55290 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH13P55290 AL162578.1-201ENST00000406202 378 ntBASIC2.45□□□□□ -2.02
CDH13P55290 MIR548F1-201ENST00000408667 84 ntBASIC2.45□□□□□ -2.02
CDH13P55290 RNU6-1140P-201ENST00000410517 106 ntBASIC2.45□□□□□ -2.02
CDH13P55290 AC008267.5-201ENST00000424928 265 ntBASIC2.45□□□□□ -2.02
CDH13P55290 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH13P55290 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
CDH13P55290 AL031274.1-201ENST00000450334 232 ntBASIC2.45□□□□□ -2.02
CDH13P55290 SNORD109B-201ENST00000458961 67 ntBASIC2.45□□□□□ -2.02
CDH13P55290 SNORD109A-201ENST00000459128 67 ntBASIC2.45□□□□□ -2.02
CDH13P55290 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH13P55290 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH13P55290 AC096725.1-201ENST00000514266 313 ntBASIC2.45□□□□□ -2.02
CDH13P55290 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH13P55290 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH13P55290 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH13P55290 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH13P55290 AL356157.2-201ENST00000605122 111 ntBASIC2.45□□□□□ -2.02
CDH13P55290 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH13P55290 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH13P55290 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH13P55290 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH13P55290 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH13P55290 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH13P55290 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CDH13P55290 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH13P55290 RNU6-428P-201ENST00000362942 107 ntBASIC2.44□□□□□ -2.02
CDH13P55290 Y_RNA.100-201ENST00000363141 102 ntBASIC2.44□□□□□ -2.02
CDH13P55290 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH13P55290 SNORD115-47-201ENST00000391226 86 ntBASIC2.44□□□□□ -2.02
CDH13P55290 RNU6-293P-201ENST00000411259 106 ntBASIC2.44□□□□□ -2.02
CDH13P55290 AC243964.1-201ENST00000441814 261 ntBASIC2.44□□□□□ -2.02
CDH13P55290 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH13P55290 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH13P55290 CYP2C59P-201ENST00000457790 269 ntBASIC2.44□□□□□ -2.02
CDH13P55290 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH13P55290 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH13P55290 RNU2-53P-201ENST00000516257 147 ntBASIC2.44□□□□□ -2.02
CDH13P55290 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
CDH13P55290 RNU6-323P-201ENST00000521915 107 ntBASIC2.44□□□□□ -2.02
CDH13P55290 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH13P55290 ELOCP29-201ENST00000588193 334 ntBASIC2.44□□□□□ -2.02
CDH13P55290 AL357078.3-201ENST00000607528 618 ntBASIC2.44□□□□□ -2.02
CDH13P55290 RMST_3.1-201ENST00000611651 109 ntBASIC2.44□□□□□ -2.02
CDH13P55290 AC104237.2-201ENST00000612456 443 ntBASIC2.44□□□□□ -2.02
CDH13P55290 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
CDH13P55290 AC009233.1-201ENST00000616477 371 ntBASIC2.44□□□□□ -2.02
CDH13P55290 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH13P55290 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH13P55290 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDH13P55290 RNU6-859P-201ENST00000362728 107 ntBASIC2.43□□□□□ -2.02
CDH13P55290 RNU6-655P-201ENST00000362858 107 ntBASIC2.43□□□□□ -2.02
CDH13P55290 RNU6-1210P-201ENST00000363775 107 ntBASIC2.43□□□□□ -2.02
CDH13P55290 Y_RNA.295-201ENST00000364918 102 ntBASIC2.43□□□□□ -2.02
CDH13P55290 RNA5SP240-201ENST00000365355 128 ntBASIC2.43□□□□□ -2.02
CDH13P55290 U8.8-201ENST00000365399 135 ntBASIC2.43□□□□□ -2.02
CDH13P55290 RNU6-1072P-201ENST00000384703 107 ntBASIC2.43□□□□□ -2.02
CDH13P55290 RNU6-443P-201ENST00000384780 107 ntBASIC2.43□□□□□ -2.02
CDH13P55290 MIR95-201ENST00000385072 81 ntBASIC2.43□□□□□ -2.02
CDH13P55290 MIR1277-201ENST00000408536 78 ntBASIC2.43□□□□□ -2.02
CDH13P55290 RNU2-63P-201ENST00000410792 194 ntBASIC2.43□□□□□ -2.02
CDH13P55290 COTL1P1-201ENST00000422309 375 ntBASIC2.43□□□□□ -2.02
CDH13P55290 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH13P55290 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH13P55290 RPS15AP10-201ENST00000432472 382 ntBASIC2.43□□□□□ -2.02
CDH13P55290 NDUFA5P4-201ENST00000436704 385 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AC107083.1-201ENST00000439643 279 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AL359672.1-201ENST00000442302 409 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.43□□□□□ -2.02
CDH13P55290 RPL39P29-201ENST00000447779 157 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AC073901.1-201ENST00000462471 408 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AP000852.1-201ENST00000472460 573 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AL121594.1-201ENST00000475906 575 ntBASIC2.43□□□□□ -2.02
CDH13P55290 RPS29P25-201ENST00000481709 171 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AC090096.1-201ENST00000489168 390 ntBASIC2.43□□□□□ -2.02
CDH13P55290 TRBVA-201ENST00000498804 316 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AK3P2-201ENST00000507976 429 ntBASIC2.43□□□□□ -2.02
CDH13P55290 Y_RNA.665-201ENST00000516177 98 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AC115990.1-201ENST00000526957 301 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH13P55290 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH13P55290 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.43□□□□□ -2.02
CDH13P55290 AL133241.1-201ENST00000556832 487 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AC091135.1-201ENST00000585943 307 ntBASIC2.43□□□□□ -2.02
CDH13P55290 RPL30P11-203ENST00000598995 310 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AL033523.1-201ENST00000605153 153 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AL121757.2-201ENST00000611223 313 ntBASIC2.43□□□□□ -2.02
CDH13P55290 AC097372.5-201ENST00000623665 376 ntBASIC2.43□□□□□ -2.02
CDH13P55290 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH13P55290 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH13P55290 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH13P55290 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CDH13P55290 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDH13P55290 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH13P55290 Y_RNA.530-201ENST00000384587 101 ntBASIC2.42□□□□□ -2.02
CDH13P55290 MIR544A-201ENST00000384855 91 ntBASIC2.42□□□□□ -2.02
CDH13P55290 RNU6-332P-201ENST00000391193 108 ntBASIC2.42□□□□□ -2.02
CDH13P55290 CBX3P9-201ENST00000402326 552 ntBASIC2.42□□□□□ -2.02
CDH13P55290 NDUFB4P4-201ENST00000404822 243 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms