Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 BNIP3P16-201ENST00000589779 534 ntBASIC2.75□□□□□ -1.97
CDH12P55289 VN1R107P-201ENST00000601784 209 ntBASIC2.75□□□□□ -1.97
CDH12P55289 AC008739.3-201ENST00000603262 127 ntBASIC2.75□□□□□ -1.97
CDH12P55289 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH12P55289 AC018889.1-201ENST00000605372 397 ntBASIC2.75□□□□□ -1.97
CDH12P55289 MIR1302-2-201ENST00000607096 138 ntBASIC2.75□□□□□ -1.97
CDH12P55289 MIR8076-201ENST00000611401 83 ntBASIC2.75□□□□□ -1.97
CDH12P55289 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CDH12P55289 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH12P55289 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH12P55289 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH12P55289 AC010889.1-201ENST00000566193 2666 ntBASIC2.74□□□□□ -1.97
CDH12P55289 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH12P55289 MIR22-201ENST00000362190 85 ntBASIC2.74□□□□□ -1.97
CDH12P55289 Y_RNA.197-201ENST00000364004 102 ntBASIC2.74□□□□□ -1.97
CDH12P55289 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH12P55289 Y_RNA.395-201ENST00000383945 109 ntBASIC2.74□□□□□ -1.97
CDH12P55289 MIR7-3-201ENST00000384898 110 ntBASIC2.74□□□□□ -1.97
CDH12P55289 RNU6-750P-201ENST00000390946 107 ntBASIC2.74□□□□□ -1.97
CDH12P55289 RNU1-101P-201ENST00000391171 127 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AL031121.1-201ENST00000406553 254 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH12P55289 AC243428.1-201ENST00000421099 264 ntBASIC2.74□□□□□ -1.97
CDH12P55289 BX276092.3-201ENST00000424182 230 ntBASIC2.74□□□□□ -1.97
CDH12P55289 YME1L1P1-201ENST00000429435 297 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AL591043.1-201ENST00000432461 424 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC007969.2-201ENST00000441891 191 ntBASIC2.74□□□□□ -1.97
CDH12P55289 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH12P55289 PRSS3P4-201ENST00000453323 162 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC133134.1-201ENST00000466800 359 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AP001025.1-201ENST00000486139 332 ntBASIC2.74□□□□□ -1.97
CDH12P55289 ACA59.1-201ENST00000515966 143 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC009812.2-201ENST00000517657 457 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC007536.1-201ENST00000533382 349 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH12P55289 MIR4444-1-201ENST00000581696 74 ntBASIC2.74□□□□□ -1.97
CDH12P55289 MIR4444-2-201ENST00000584390 74 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC078795.3-201ENST00000602913 472 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC133104.2-201ENST00000615272 193 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC012314.7-201ENST00000619693 93 ntBASIC2.74□□□□□ -1.97
CDH12P55289 AC134503.1-201ENST00000633048 54 ntBASIC2.74□□□□□ -1.97
CDH12P55289 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH12P55289 AC004944.1-201ENST00000517807 3059 ntBASIC2.73□□□□□ -1.97
CDH12P55289 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH12P55289 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH12P55289 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH12P55289 Y_RNA.48-201ENST00000362710 103 ntBASIC2.73□□□□□ -1.97
CDH12P55289 RNU6-227P-201ENST00000362865 103 ntBASIC2.73□□□□□ -1.97
CDH12P55289 RNU6-1040P-201ENST00000383974 107 ntBASIC2.73□□□□□ -1.97
CDH12P55289 RNU6-843P-201ENST00000384454 104 ntBASIC2.73□□□□□ -1.97
CDH12P55289 RNVU1-14-201ENST00000384770 164 ntBASIC2.73□□□□□ -1.97
CDH12P55289 RNA5SP344-201ENST00000411081 104 ntBASIC2.73□□□□□ -1.97
CDH12P55289 AL031659.1-201ENST00000447075 539 ntBASIC2.73□□□□□ -1.97
CDH12P55289 FTH1P2-201ENST00000466086 412 ntBASIC2.73□□□□□ -1.97
CDH12P55289 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.73□□□□□ -1.97
CDH12P55289 SNORD19.2-201ENST00000516978 73 ntBASIC2.73□□□□□ -1.97
CDH12P55289 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.73□□□□□ -1.97
CDH12P55289 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH12P55289 AC025281.1-201ENST00000567026 265 ntBASIC2.73□□□□□ -1.97
CDH12P55289 AC010653.1-201ENST00000571108 881 ntBASIC2.73□□□□□ -1.97
CDH12P55289 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH12P55289 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH12P55289 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH12P55289 AP001836.1-201ENST00000604675 523 ntBASIC2.73□□□□□ -1.97
CDH12P55289 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH12P55289 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH12P55289 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDH12P55289 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CDH12P55289 RNU6-1115P-201ENST00000362490 106 ntBASIC2.72□□□□□ -1.97
CDH12P55289 SNORA63.1-201ENST00000362493 131 ntBASIC2.72□□□□□ -1.97
CDH12P55289 Y_RNA.31-201ENST00000362574 102 ntBASIC2.72□□□□□ -1.97
CDH12P55289 SNORD50.1-201ENST00000362987 71 ntBASIC2.72□□□□□ -1.97
CDH12P55289 RNA5SP72-201ENST00000364442 117 ntBASIC2.72□□□□□ -1.97
CDH12P55289 SNORA54-201ENST00000384281 123 ntBASIC2.72□□□□□ -1.97
CDH12P55289 RNU6-19P-201ENST00000384718 107 ntBASIC2.72□□□□□ -1.97
CDH12P55289 MIR181A2-201ENST00000384863 110 ntBASIC2.72□□□□□ -1.97
CDH12P55289 MIR559-201ENST00000385188 96 ntBASIC2.72□□□□□ -1.97
CDH12P55289 MIR670-201ENST00000390142 98 ntBASIC2.72□□□□□ -1.97
CDH12P55289 AL591034.2-201ENST00000402839 359 ntBASIC2.72□□□□□ -1.97
CDH12P55289 AP000275.1-201ENST00000411943 390 ntBASIC2.72□□□□□ -1.97
CDH12P55289 PTGES3P4-201ENST00000426243 356 ntBASIC2.72□□□□□ -1.97
CDH12P55289 AC009414.1-201ENST00000427200 443 ntBASIC2.72□□□□□ -1.97
CDH12P55289 AC004383.1-201ENST00000438135 289 ntBASIC2.72□□□□□ -1.97
CDH12P55289 RPS29P6-201ENST00000438196 145 ntBASIC2.72□□□□□ -1.97
CDH12P55289 MTND5P30-201ENST00000452896 1731 ntBASIC2.72□□□□□ -1.97
CDH12P55289 RPS26P21-201ENST00000475397 348 ntBASIC2.72□□□□□ -1.97
CDH12P55289 RN7SL504P-201ENST00000494496 287 ntBASIC2.72□□□□□ -1.97
CDH12P55289 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH12P55289 AC022447.4-201ENST00000504053 364 ntBASIC2.72□□□□□ -1.97
CDH12P55289 AC074250.1-201ENST00000511117 192 ntBASIC2.72□□□□□ -1.97
CDH12P55289 RN7SKP282-201ENST00000516824 299 ntBASIC2.72□□□□□ -1.97
CDH12P55289 RN7SKP272-201ENST00000516988 232 ntBASIC2.72□□□□□ -1.97
CDH12P55289 SNORA31.26-201ENST00000517250 137 ntBASIC2.72□□□□□ -1.97
CDH12P55289 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.72□□□□□ -1.97
CDH12P55289 CBX3P8-201ENST00000532412 525 ntBASIC2.72□□□□□ -1.97
CDH12P55289 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH12P55289 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDH12P55289 MIR5004-201ENST00000579078 107 ntBASIC2.72□□□□□ -1.97
CDH12P55289 MIR4429-201ENST00000580105 73 ntBASIC2.72□□□□□ -1.97
CDH12P55289 MIR4273-201ENST00000582824 84 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms