Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
COPAP53621 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.19□□□□□ -1.9
COPAP53621 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.19□□□□□ -1.9
COPAP53621 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COPAP53621 RNU6-428P-201ENST00000362942 107 ntBASIC3.19□□□□□ -1.9
COPAP53621 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
COPAP53621 Y_RNA.419-201ENST00000384041 102 ntBASIC3.19□□□□□ -1.9
COPAP53621 SNORA54-201ENST00000384281 123 ntBASIC3.19□□□□□ -1.9
COPAP53621 RNU6-933P-201ENST00000384424 107 ntBASIC3.19□□□□□ -1.9
COPAP53621 RNU6-19P-201ENST00000384718 107 ntBASIC3.19□□□□□ -1.9
COPAP53621 MIR627-201ENST00000384979 97 ntBASIC3.19□□□□□ -1.9
COPAP53621 RNY4P36-201ENST00000391116 96 ntBASIC3.19□□□□□ -1.9
COPAP53621 MTCYBP4-201ENST00000401524 249 ntBASIC3.19□□□□□ -1.9
COPAP53621 AC096649.2-201ENST00000416186 393 ntBASIC3.19□□□□□ -1.9
COPAP53621 AL117339.3-201ENST00000418733 162 ntBASIC3.19□□□□□ -1.9
COPAP53621 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.19□□□□□ -1.9
COPAP53621 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
COPAP53621 AL358075.3-201ENST00000426289 226 ntBASIC3.19□□□□□ -1.9
COPAP53621 RNU7-187P-201ENST00000458985 68 ntBASIC3.19□□□□□ -1.9
COPAP53621 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.19□□□□□ -1.9
COPAP53621 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.19□□□□□ -1.9
COPAP53621 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.19□□□□□ -1.9
COPAP53621 Y_RNA.718-201ENST00000517110 102 ntBASIC3.19□□□□□ -1.9
COPAP53621 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.19□□□□□ -1.9
COPAP53621 APOOP3-201ENST00000536787 586 ntBASIC3.19□□□□□ -1.9
COPAP53621 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.19□□□□□ -1.9
COPAP53621 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.19□□□□□ -1.9
COPAP53621 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
COPAP53621 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.19□□□□□ -1.9
COPAP53621 PISRT1.1-201ENST00000616930 107 ntBASIC3.19□□□□□ -1.9
COPAP53621 UCA1.1-201ENST00000620952 75 ntBASIC3.19□□□□□ -1.9
COPAP53621 AC091903.1-201ENST00000624322 454 ntBASIC3.19□□□□□ -1.9
COPAP53621 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COPAP53621 MTND5P19-201ENST00000424872 1794 ntBASIC3.18□□□□□ -1.9
COPAP53621 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COPAP53621 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.18□□□□□ -1.9
COPAP53621 SNORA80A-201ENST00000363922 136 ntBASIC3.18□□□□□ -1.9
COPAP53621 RNU6-790P-201ENST00000384479 105 ntBASIC3.18□□□□□ -1.9
COPAP53621 RNU6-306P-201ENST00000384617 107 ntBASIC3.18□□□□□ -1.9
COPAP53621 SNORA26.7-201ENST00000391288 122 ntBASIC3.18□□□□□ -1.9
COPAP53621 AL030996.1-201ENST00000411430 235 ntBASIC3.18□□□□□ -1.9
COPAP53621 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
COPAP53621 PTGES3P4-201ENST00000426243 356 ntBASIC3.18□□□□□ -1.9
COPAP53621 AL591043.1-201ENST00000432461 424 ntBASIC3.18□□□□□ -1.9
COPAP53621 PCMTD1P1-201ENST00000455560 355 ntBASIC3.18□□□□□ -1.9
COPAP53621 AC107626.1-201ENST00000471084 183 ntBASIC3.18□□□□□ -1.9
COPAP53621 AC096576.1-201ENST00000489014 359 ntBASIC3.18□□□□□ -1.9
COPAP53621 Y_RNA.708-201ENST00000516950 96 ntBASIC3.18□□□□□ -1.9
COPAP53621 AP002404.1-201ENST00000532005 451 ntBASIC3.18□□□□□ -1.9
COPAP53621 AC022080.3-201ENST00000544433 482 ntBASIC3.18□□□□□ -1.9
COPAP53621 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.18□□□□□ -1.9
COPAP53621 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.18□□□□□ -1.9
COPAP53621 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.18□□□□□ -1.9
COPAP53621 AC009163.5-201ENST00000575421 637 ntBASIC3.18□□□□□ -1.9
COPAP53621 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.18□□□□□ -1.9
COPAP53621 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
COPAP53621 AC009314.1-201ENST00000603871 304 ntBASIC3.18□□□□□ -1.9
COPAP53621 AC091152.3-201ENST00000604227 325 ntBASIC3.18□□□□□ -1.9
COPAP53621 AL033523.1-201ENST00000605153 153 ntBASIC3.18□□□□□ -1.9
COPAP53621 AC124303.1-201ENST00000605703 360 ntBASIC3.18□□□□□ -1.9
COPAP53621 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.18□□□□□ -1.9
COPAP53621 AL133215.3-201ENST00000609801 448 ntBASIC3.18□□□□□ -1.9
COPAP53621 AC133104.2-201ENST00000615272 193 ntBASIC3.18□□□□□ -1.9
COPAP53621 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
COPAP53621 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.18□□□□□ -1.9
COPAP53621 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COPAP53621 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
COPAP53621 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.18□□□□□ -1.9
COPAP53621 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COPAP53621 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COPAP53621 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
COPAP53621 Y_RNA.151-201ENST00000363566 112 ntBASIC3.17□□□□□ -1.9
COPAP53621 RNU6-1188P-201ENST00000363795 107 ntBASIC3.17□□□□□ -1.9
COPAP53621 SNORA51.4-201ENST00000364993 124 ntBASIC3.17□□□□□ -1.9
COPAP53621 SNORD116-29-201ENST00000384516 83 ntBASIC3.17□□□□□ -1.9
COPAP53621 MIR517A-201ENST00000385001 87 ntBASIC3.17□□□□□ -1.9
COPAP53621 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.17□□□□□ -1.9
COPAP53621 SNORA11.2-201ENST00000408318 127 ntBASIC3.17□□□□□ -1.9
COPAP53621 RNU6-1304P-201ENST00000411374 106 ntBASIC3.17□□□□□ -1.9
COPAP53621 AC009414.1-201ENST00000427200 443 ntBASIC3.17□□□□□ -1.9
COPAP53621 RPL21P2-201ENST00000440049 481 ntBASIC3.17□□□□□ -1.9
COPAP53621 AC124916.1-201ENST00000444020 547 ntBASIC3.17□□□□□ -1.9
COPAP53621 Y_RNA.653-201ENST00000459091 95 ntBASIC3.17□□□□□ -1.9
COPAP53621 MED28P2-201ENST00000475771 317 ntBASIC3.17□□□□□ -1.9
COPAP53621 AC097462.2-201ENST00000504623 481 ntBASIC3.17□□□□□ -1.9
COPAP53621 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.17□□□□□ -1.9
COPAP53621 MTCYBP40-201ENST00000509390 1135 ntBASIC3.17□□□□□ -1.9
COPAP53621 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.17□□□□□ -1.9
COPAP53621 RNU5F-8P-201ENST00000515941 111 ntBASIC3.17□□□□□ -1.9
COPAP53621 RNU6-1170P-201ENST00000515974 106 ntBASIC3.17□□□□□ -1.9
COPAP53621 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.17□□□□□ -1.9
COPAP53621 CR383656.8-201ENST00000549046 145 ntBASIC3.17□□□□□ -1.9
COPAP53621 TRAV32-201ENST00000553993 340 ntBASIC3.17□□□□□ -1.9
COPAP53621 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.17□□□□□ -1.9
COPAP53621 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.17□□□□□ -1.9
COPAP53621 RPL23AP88-201ENST00000605759 454 ntBASIC3.17□□□□□ -1.9
COPAP53621 AC138627.2-201ENST00000624202 601 ntBASIC3.17□□□□□ -1.9
COPAP53621 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
COPAP53621 RNU6-336P-201ENST00000364891 107 ntBASIC3.16□□□□□ -1.9
COPAP53621 Y_RNA.510-201ENST00000384511 114 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms