Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RNU4-56P-201ENST00000364700 142 ntBASIC2.57□□□□□ -2
CCR9P51686 SNORA26.3-201ENST00000391119 136 ntBASIC2.57□□□□□ -2
CCR9P51686 AL591034.2-201ENST00000402839 359 ntBASIC2.57□□□□□ -2
CCR9P51686 RN7SKP158-201ENST00000410453 326 ntBASIC2.57□□□□□ -2
CCR9P51686 AL030996.1-201ENST00000411430 235 ntBASIC2.57□□□□□ -2
CCR9P51686 AC007064.1-201ENST00000412238 351 ntBASIC2.57□□□□□ -2
CCR9P51686 AL645568.3-201ENST00000433683 316 ntBASIC2.57□□□□□ -2
CCR9P51686 AC112220.1-201ENST00000434628 355 ntBASIC2.57□□□□□ -2
CCR9P51686 RPL32P28-201ENST00000443577 397 ntBASIC2.57□□□□□ -2
CCR9P51686 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.57□□□□□ -2
CCR9P51686 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.57□□□□□ -2
CCR9P51686 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.57□□□□□ -2
CCR9P51686 AC117440.1-201ENST00000474107 571 ntBASIC2.57□□□□□ -2
CCR9P51686 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.57□□□□□ -2
CCR9P51686 ELOCP31-201ENST00000540463 467 ntBASIC2.57□□□□□ -2
CCR9P51686 AC007375.1-201ENST00000554513 578 ntBASIC2.57□□□□□ -2
CCR9P51686 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.57□□□□□ -2
CCR9P51686 MIR5680-201ENST00000577577 84 ntBASIC2.57□□□□□ -2
CCR9P51686 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.57□□□□□ -2
CCR9P51686 AC068944.2-201ENST00000610373 403 ntBASIC2.57□□□□□ -2
CCR9P51686 AC093913.1-201ENST00000614178 329 ntBASIC2.57□□□□□ -2
CCR9P51686 AL138726.1-201ENST00000614873 333 ntBASIC2.57□□□□□ -2
CCR9P51686 AL160394.1-201ENST00000624765 724 ntBASIC2.57□□□□□ -2
CCR9P51686 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCR9P51686 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.57□□□□□ -2
CCR9P51686 MTND4P5-201ENST00000435821 1374 ntBASIC2.57□□□□□ -2
CCR9P51686 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCR9P51686 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.56□□□□□ -2
CCR9P51686 SNORA63.1-201ENST00000362493 131 ntBASIC2.56□□□□□ -2
CCR9P51686 RNU1-23P-201ENST00000363361 144 ntBASIC2.56□□□□□ -2
CCR9P51686 Y_RNA.135-201ENST00000363439 95 ntBASIC2.56□□□□□ -2
CCR9P51686 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCR9P51686 RNU6-142P-201ENST00000384019 107 ntBASIC2.56□□□□□ -2
CCR9P51686 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
CCR9P51686 RNU6-933P-201ENST00000384424 107 ntBASIC2.56□□□□□ -2
CCR9P51686 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CCR9P51686 RNU6-325P-201ENST00000411132 105 ntBASIC2.56□□□□□ -2
CCR9P51686 HMGB3P2-201ENST00000411913 584 ntBASIC2.56□□□□□ -2
CCR9P51686 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
CCR9P51686 NFU1P2-201ENST00000448700 469 ntBASIC2.56□□□□□ -2
CCR9P51686 AC090525.1-201ENST00000479116 478 ntBASIC2.56□□□□□ -2
CCR9P51686 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
CCR9P51686 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
CCR9P51686 RNU6-826P-201ENST00000516827 104 ntBASIC2.56□□□□□ -2
CCR9P51686 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.56□□□□□ -2
CCR9P51686 AF235103.2-201ENST00000525753 346 ntBASIC2.56□□□□□ -2
CCR9P51686 AP000889.2-201ENST00000532684 490 ntBASIC2.56□□□□□ -2
CCR9P51686 AC060780.3-201ENST00000589464 80 ntBASIC2.56□□□□□ -2
CCR9P51686 AL161756.2-201ENST00000604597 246 ntBASIC2.56□□□□□ -2
CCR9P51686 AC091953.5-201ENST00000622919 233 ntBASIC2.56□□□□□ -2
CCR9P51686 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.56□□□□□ -2
CCR9P51686 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCR9P51686 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
CCR9P51686 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
CCR9P51686 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.56□□□□□ -2
CCR9P51686 AC069528.2-201ENST00000624849 1991 ntBASIC2.56□□□□□ -2
CCR9P51686 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCR9P51686 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCR9P51686 RNU6-562P-201ENST00000362731 107 ntBASIC2.55□□□□□ -2
CCR9P51686 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
CCR9P51686 SNORA9.2-201ENST00000365361 133 ntBASIC2.55□□□□□ -2
CCR9P51686 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
CCR9P51686 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCR9P51686 Y_RNA.504-201ENST00000384481 104 ntBASIC2.55□□□□□ -2
CCR9P51686 MIR512-1-201ENST00000384913 84 ntBASIC2.55□□□□□ -2
CCR9P51686 MIR134-201ENST00000385258 73 ntBASIC2.55□□□□□ -2
CCR9P51686 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCR9P51686 AL356967.1-201ENST00000406305 431 ntBASIC2.55□□□□□ -2
CCR9P51686 AC005326.1-201ENST00000429197 123 ntBASIC2.55□□□□□ -2
CCR9P51686 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.55□□□□□ -2
CCR9P51686 GPM6BP3-201ENST00000442797 145 ntBASIC2.55□□□□□ -2
CCR9P51686 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.55□□□□□ -2
CCR9P51686 RPS29P27-201ENST00000463711 170 ntBASIC2.55□□□□□ -2
CCR9P51686 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.55□□□□□ -2
CCR9P51686 AC091874.1-201ENST00000511402 339 ntBASIC2.55□□□□□ -2
CCR9P51686 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
CCR9P51686 AC018630.3-201ENST00000542637 96 ntBASIC2.55□□□□□ -2
CCR9P51686 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.55□□□□□ -2
CCR9P51686 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.55□□□□□ -2
CCR9P51686 MIR3672-201ENST00000584290 82 ntBASIC2.55□□□□□ -2
CCR9P51686 AC018638.8-201ENST00000588755 281 ntBASIC2.55□□□□□ -2
CCR9P51686 AC023043.2-201ENST00000589678 1026 ntBASIC2.55□□□□□ -2
CCR9P51686 AC060766.3-201ENST00000591442 263 ntBASIC2.55□□□□□ -2
CCR9P51686 AL136221.1-201ENST00000621449 509 ntBASIC2.55□□□□□ -2
CCR9P51686 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.55□□□□□ -2
CCR9P51686 AC009541.1-201ENST00000438279 2662 ntBASIC2.55□□□□□ -2
CCR9P51686 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
CCR9P51686 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCR9P51686 MTCO1P12-201ENST00000414273 1543 ntBASIC2.54□□□□□ -2
CCR9P51686 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCR9P51686 RNU6-1013P-201ENST00000384180 107 ntBASIC2.54□□□□□ -2
CCR9P51686 SNORA54-201ENST00000384281 123 ntBASIC2.54□□□□□ -2
CCR9P51686 MIR181A2-201ENST00000384863 110 ntBASIC2.54□□□□□ -2
CCR9P51686 MIR183-201ENST00000384958 110 ntBASIC2.54□□□□□ -2
CCR9P51686 EIF1AXP1-201ENST00000419267 435 ntBASIC2.54□□□□□ -2
CCR9P51686 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.54□□□□□ -2
CCR9P51686 MTND3P9-201ENST00000429526 346 ntBASIC2.54□□□□□ -2
CCR9P51686 USP9YP28-201ENST00000435142 589 ntBASIC2.54□□□□□ -2
CCR9P51686 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.54□□□□□ -2
CCR9P51686 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms