Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.37□□□□□ -2.03
NEDD4P46934 AC004520.1-201ENST00000608362 1413 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 Y_RNA.324-201ENST00000365165 102 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 RNU4-12P-201ENST00000365233 139 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 RNU6-38P-201ENST00000384085 107 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 RNU6-748P-201ENST00000384648 107 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 Y_RNA.619-201ENST00000410951 90 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 AC016831.2-201ENST00000417179 352 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 SNRPEP10-201ENST00000420249 274 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.37□□□□□ -2.03
NEDD4P46934 MTND1P4-201ENST00000435196 415 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.37□□□□□ -2.03
NEDD4P46934 UBE2V1P8-201ENST00000437166 265 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD4P46934 RNU6-333P-201ENST00000459117 107 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 MTCO3P38-201ENST00000468910 766 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.37□□□□□ -2.03
NEDD4P46934 ACA59.2-201ENST00000517061 156 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD4P46934 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD4P46934 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD4P46934 OR11H5P-201ENST00000554039 926 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 uc_338.14-201ENST00000613162 166 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NEDD4P46934 AC092881.1-201ENST00000638218 2733 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.36□□□□□ -2.03
NEDD4P46934 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEDD4P46934 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.36□□□□□ -2.03
NEDD4P46934 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.36□□□□□ -2.03
NEDD4P46934 RNY3P3-201ENST00000363816 102 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 SNORA68.1-201ENST00000364537 132 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 RNA5SP138-201ENST00000365098 114 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 RNU6-1083P-201ENST00000384022 107 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 FO393413.1-201ENST00000402892 195 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.36□□□□□ -2.03
NEDD4P46934 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.36□□□□□ -2.03
NEDD4P46934 PGBD4P6-201ENST00000421501 610 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.36□□□□□ -2.03
NEDD4P46934 MTND3P16-201ENST00000452205 344 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 snoU109.2-201ENST00000459316 135 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 AC025033.1-201ENST00000463883 194 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 AC011352.1-201ENST00000512300 793 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 MRPS36P2-201ENST00000512569 299 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 AC069113.1-201ENST00000517763 267 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.36□□□□□ -2.03
NEDD4P46934 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.36□□□□□ -2.03
NEDD4P46934 CENPUP1-201ENST00000526649 1202 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 CYCSP27-201ENST00000527643 293 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 GLYCAM1-201ENST00000546596 285 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.36□□□□□ -2.03
NEDD4P46934 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.36□□□□□ -2.03
NEDD4P46934 AC019159.1-201ENST00000605094 187 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 RNU6-91P-201ENST00000607774 107 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 AC026585.1-201ENST00000619582 524 ntBASIC2.36□□□□□ -2.03
NEDD4P46934 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.36□□□□□ -2.03
NEDD4P46934 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.35□□□□□ -2.03
NEDD4P46934 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
NEDD4P46934 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NEDD4P46934 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NEDD4P46934 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.35□□□□□ -2.03
NEDD4P46934 SNORD114-1-201ENST00000362705 72 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 RNU4-66P-201ENST00000365199 138 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 RNA5SP37-201ENST00000365420 130 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 MIR147B-201ENST00000390185 80 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 RNU6-1068P-201ENST00000410958 103 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.35□□□□□ -2.03
NEDD4P46934 SUMO1P4-201ENST00000429430 302 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.35□□□□□ -2.03
NEDD4P46934 CALM1P1-201ENST00000442082 433 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.35□□□□□ -2.03
NEDD4P46934 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.35□□□□□ -2.03
NEDD4P46934 snoU13.15-201ENST00000459407 104 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 snoU13.26-201ENST00000459452 105 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AL121769.1-201ENST00000469473 401 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 CCDC34P1-201ENST00000507441 517 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 RNU5F-8P-201ENST00000515941 111 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 Y_RNA.687-201ENST00000516558 91 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 RNU5B-3P-201ENST00000516601 115 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.35□□□□□ -2.03
NEDD4P46934 MTND1P35-201ENST00000526739 508 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 CR383656.8-201ENST00000549046 145 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 RPS3AP23-202ENST00000574601 686 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AC146944.4-201ENST00000602697 718 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AC009314.1-201ENST00000603871 304 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AL670379.10-201ENST00000604330 253 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AL670379.9-201ENST00000605428 253 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 AC092794.1-201ENST00000612734 582 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 RMST_7.1-201ENST00000621935 268 ntBASIC2.35□□□□□ -2.03
NEDD4P46934 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
NEDD4P46934 AC010329.5-201ENST00000623497 2174 ntBASIC2.34□□□□□ -2.03
NEDD4P46934 OR4G1P-203ENST00000641984 1631 ntBASIC2.34□□□□□ -2.03
NEDD4P46934 Y_RNA.38-201ENST00000362617 102 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 RNU6-942P-201ENST00000363002 107 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 RNU6-1090P-201ENST00000364065 94 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 Y_RNA.453-201ENST00000384223 109 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 MIR514A2-201ENST00000385131 88 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 MIR514A3-201ENST00000385132 88 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 MIR548F1-201ENST00000408667 84 ntBASIC2.34□□□□□ -2.04
NEDD4P46934 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms