Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC008267.6-201ENST00000441664 139 ntBASIC5.09□□□□□ -1.59
CLCN1P35523 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN1P35523 AC010409.1-201ENST00000487382 476 ntBASIC5.09□□□□□ -1.59
CLCN1P35523 AC133555.2-201ENST00000550213 292 ntBASIC5.09□□□□□ -1.59
CLCN1P35523 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN1P35523 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCN1P35523 MIR548X2-201ENST00000579776 100 ntBASIC5.09□□□□□ -1.59
CLCN1P35523 AC011471.1-201ENST00000585766 187 ntBASIC5.09□□□□□ -1.59
CLCN1P35523 AC005520.5-201ENST00000613926 164 ntBASIC5.09□□□□□ -1.59
CLCN1P35523 AC087385.3-201ENST00000620477 187 ntBASIC5.09□□□□□ -1.59
CLCN1P35523 AC091905.2-201ENST00000623143 306 ntBASIC5.09□□□□□ -1.59
CLCN1P35523 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCN1P35523 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CLCN1P35523 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCN1P35523 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCN1P35523 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCN1P35523 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCN1P35523 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN1P35523 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN1P35523 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN1P35523 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLCN1P35523 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCN1P35523 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLCN1P35523 RNA5SP191-201ENST00000362585 102 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN1P35523 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLCN1P35523 RNU6-381P-201ENST00000391259 108 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 AL590762.2-201ENST00000395798 571 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 EBAG9P1-201ENST00000418955 543 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCN1P35523 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLCN1P35523 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCN1P35523 AC107626.1-201ENST00000471084 183 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 AC006445.2-201ENST00000510061 472 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 RNU5F-2P-201ENST00000516066 82 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCN1P35523 AP004242.1-201ENST00000533701 349 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 FAM27B-201ENST00000610601 213 ntBASIC5.08□□□□□ -1.6
CLCN1P35523 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLCN1P35523 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCN1P35523 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN1P35523 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN1P35523 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLCN1P35523 MIR423-201ENST00000362201 94 ntBASIC5.07□□□□□ -1.6
CLCN1P35523 RNU1-82P-201ENST00000390851 165 ntBASIC5.07□□□□□ -1.6
CLCN1P35523 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN1P35523 SCARNA22-201ENST00000503991 125 ntBASIC5.07□□□□□ -1.6
CLCN1P35523 RN7SKP164-201ENST00000516138 266 ntBASIC5.07□□□□□ -1.6
CLCN1P35523 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN1P35523 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN1P35523 HMGN2P15-201ENST00000585707 270 ntBASIC5.07□□□□□ -1.6
CLCN1P35523 AL034555.1-201ENST00000604816 211 ntBASIC5.07□□□□□ -1.6
CLCN1P35523 AC110741.2-201ENST00000605278 268 ntBASIC5.07□□□□□ -1.6
CLCN1P35523 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN1P35523 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCN1P35523 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN1P35523 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLCN1P35523 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN1P35523 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN1P35523 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN1P35523 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN1P35523 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLCN1P35523 AC010733.2-201ENST00000589496 5702 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCN1P35523 AC010332.2-201ENST00000613083 1904 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 RNU6-454P-201ENST00000364292 107 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 U3.22-201ENST00000391120 215 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 MIR1183-201ENST00000408856 89 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 CYCSP48-201ENST00000417124 323 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 AC006466.1-201ENST00000438721 289 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 AL078604.3-201ENST00000615580 211 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLCN1P35523 AC007496.3-201ENST00000624987 3443 ntBASIC5.06□□□□□ -1.6
CLCN1P35523 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN1P35523 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CLCN1P35523 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCN1P35523 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CLCN1P35523 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN1P35523 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLCN1P35523 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLCN1P35523 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN1P35523 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN1P35523 SNORA40-201ENST00000388090 126 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 COX6B1P1-201ENST00000415962 213 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 AC079168.2-201ENST00000453977 416 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 RNA5SP310-201ENST00000459084 116 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 RN7SL585P-201ENST00000470538 280 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 RPL31P41-201ENST00000477967 372 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 AC136628.3-201ENST00000521868 290 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 AC021269.2-201ENST00000532318 330 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 HIGD1AP1-201ENST00000550979 275 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 AC027176.1-201ENST00000560204 514 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN1P35523 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN1P35523 MIR4644-201ENST00000579929 84 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 MIR4646-201ENST00000580775 63 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 MIR4436B2-201ENST00000581415 91 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 MIR4744-201ENST00000581563 82 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 AC090616.3-201ENST00000582184 217 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms