Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
RPA3P35244 AL391987.6-201ENST00000305671 199 ntBASIC1.22□□□□□ -2.21
RPA3P35244 Y_RNA.67-201ENST00000362870 100 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AC004965.1-201ENST00000413033 213 ntBASIC1.22□□□□□ -2.21
RPA3P35244 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RPA3P35244 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.22□□□□□ -2.21
RPA3P35244 MTND2P4-201ENST00000445034 1004 ntBASIC1.22□□□□□ -2.21
RPA3P35244 RPL39P29-201ENST00000447779 157 ntBASIC1.22□□□□□ -2.21
RPA3P35244 MTATP6P14-201ENST00000455189 673 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AC006026.2-201ENST00000457376 180 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.22□□□□□ -2.21
RPA3P35244 AC130509.1-201ENST00000464158 433 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AP000797.1-201ENST00000478870 387 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AL163540.1-201ENST00000485382 386 ntBASIC1.22□□□□□ -2.21
RPA3P35244 MTCO3P9-201ENST00000506989 781 ntBASIC1.22□□□□□ -2.21
RPA3P35244 RNA5SP337-201ENST00000517007 109 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.22□□□□□ -2.21
RPA3P35244 AP003034.1-201ENST00000534621 422 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.22□□□□□ -2.21
RPA3P35244 ZNF519P3-201ENST00000557158 1032 ntBASIC1.22□□□□□ -2.21
RPA3P35244 SUB1P4-201ENST00000566062 339 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AC002400.1-201ENST00000569310 726 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.22□□□□□ -2.21
RPA3P35244 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AL353778.1-201ENST00000603149 408 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AC092106.3-201ENST00000611308 722 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AC012409.4-201ENST00000612923 249 ntBASIC1.22□□□□□ -2.21
RPA3P35244 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.22□□□□□ -2.21
RPA3P35244 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RPA3P35244 AC008993.2-201ENST00000631744 806 ntBASIC1.22□□□□□ -2.21
RPA3P35244 AC245060.5-201ENST00000610778 3293 ntBASIC1.21□□□□□ -2.22
RPA3P35244 AC073343.1-201ENST00000328239 651 ntBASIC1.21□□□□□ -2.22
RPA3P35244 RNA5SP432-201ENST00000362480 116 ntBASIC1.21□□□□□ -2.22
RPA3P35244 SNORD56.2-201ENST00000363242 71 ntBASIC1.21□□□□□ -2.22
RPA3P35244 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 MIR122-201ENST00000385044 85 ntBASIC1.21□□□□□ -2.22
RPA3P35244 SDAD1P3-201ENST00000427380 333 ntBASIC1.21□□□□□ -2.22
RPA3P35244 AL360271.2-201ENST00000447710 161 ntBASIC1.21□□□□□ -2.22
RPA3P35244 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 DUXAP8-207ENST00000456786 622 ntBASIC1.21□□□□□ -2.22
RPA3P35244 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
RPA3P35244 MTND2P33-201ENST00000506452 1031 ntBASIC1.21□□□□□ -2.22
RPA3P35244 AC108078.2-201ENST00000510750 236 ntBASIC1.21□□□□□ -2.22
RPA3P35244 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 MIR449C-201ENST00000516047 92 ntBASIC1.21□□□□□ -2.22
RPA3P35244 RNU1-86P-201ENST00000516108 154 ntBASIC1.21□□□□□ -2.22
RPA3P35244 RNU1-107P-201ENST00000516617 154 ntBASIC1.21□□□□□ -2.22
RPA3P35244 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.21□□□□□ -2.22
RPA3P35244 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA3P35244 AC091135.1-201ENST00000585943 307 ntBASIC1.21□□□□□ -2.22
RPA3P35244 AC120349.3-201ENST00000624377 529 ntBASIC1.21□□□□□ -2.22
RPA3P35244 AL161722.3-201ENST00000605789 2983 ntBASIC1.21□□□□□ -2.22
RPA3P35244 RNU6-660P-201ENST00000364566 109 ntBASIC1.2□□□□□ -2.22
RPA3P35244 RNU6-83P-201ENST00000384568 112 ntBASIC1.2□□□□□ -2.22
RPA3P35244 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
RPA3P35244 Y_RNA.595-201ENST00000410403 105 ntBASIC1.2□□□□□ -2.22
RPA3P35244 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.2□□□□□ -2.22
RPA3P35244 RPL30P13-201ENST00000418873 348 ntBASIC1.2□□□□□ -2.22
RPA3P35244 AC118469.1-201ENST00000442943 488 ntBASIC1.2□□□□□ -2.22
RPA3P35244 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RPA3P35244 SNRPFP4-201ENST00000456366 242 ntBASIC1.2□□□□□ -2.22
RPA3P35244 snoU13.9-201ENST00000458927 103 ntBASIC1.2□□□□□ -2.22
RPA3P35244 RPL36AP21-201ENST00000490372 323 ntBASIC1.2□□□□□ -2.22
RPA3P35244 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.2□□□□□ -2.22
RPA3P35244 TPT1P8-201ENST00000510120 555 ntBASIC1.2□□□□□ -2.22
RPA3P35244 AC025465.3-201ENST00000510570 311 ntBASIC1.2□□□□□ -2.22
RPA3P35244 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.2□□□□□ -2.22
RPA3P35244 MIR4509-3-201ENST00000578671 94 ntBASIC1.2□□□□□ -2.22
RPA3P35244 AP001004.1-201ENST00000582468 324 ntBASIC1.2□□□□□ -2.22
RPA3P35244 MIR4509-2-201ENST00000583920 94 ntBASIC1.2□□□□□ -2.22
RPA3P35244 AC023043.2-201ENST00000589678 1026 ntBASIC1.2□□□□□ -2.22
RPA3P35244 AL136363.2-201ENST00000604173 851 ntBASIC1.2□□□□□ -2.22
RPA3P35244 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
RPA3P35244 MIR4509-1-201ENST00000618224 94 ntBASIC1.2□□□□□ -2.22
RPA3P35244 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.2□□□□□ -2.22
RPA3P35244 AC026585.1-201ENST00000619582 524 ntBASIC1.2□□□□□ -2.22
RPA3P35244 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RPA3P35244 AC022513.1-201ENST00000624512 117 ntBASIC1.2□□□□□ -2.22
RPA3P35244 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RPA3P35244 RNU6-271P-201ENST00000363858 105 ntBASIC1.19□□□□□ -2.22
RPA3P35244 RNU6-39P-201ENST00000384344 107 ntBASIC1.19□□□□□ -2.22
RPA3P35244 RNU1-78P-201ENST00000391248 165 ntBASIC1.19□□□□□ -2.22
RPA3P35244 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
RPA3P35244 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.19□□□□□ -2.22
RPA3P35244 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.19□□□□□ -2.22
RPA3P35244 AL590556.1-201ENST00000423231 483 ntBASIC1.19□□□□□ -2.22
RPA3P35244 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.19□□□□□ -2.22
RPA3P35244 AL669831.1-202ENST00000428504 417 ntBASIC1.19□□□□□ -2.22
RPA3P35244 RPL37P21-201ENST00000435890 276 ntBASIC1.19□□□□□ -2.22
RPA3P35244 AC007969.2-201ENST00000441891 191 ntBASIC1.19□□□□□ -2.22
RPA3P35244 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.19□□□□□ -2.22
RPA3P35244 USP9YP17-201ENST00000444617 696 ntBASIC1.19□□□□□ -2.22
RPA3P35244 AC091951.3-201ENST00000504093 246 ntBASIC1.19□□□□□ -2.22
RPA3P35244 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.19□□□□□ -2.22
RPA3P35244 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms