Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNA5SP113-201ENST00000410486 84 ntBASIC4.38□□□□□ -1.71
GPC1P35052 NDUFS5P4-201ENST00000412983 318 ntBASIC4.38□□□□□ -1.71
GPC1P35052 AC009237.10-201ENST00000414112 510 ntBASIC4.38□□□□□ -1.71
GPC1P35052 AC068287.1-201ENST00000430283 295 ntBASIC4.38□□□□□ -1.71
GPC1P35052 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.38□□□□□ -1.71
GPC1P35052 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.38□□□□□ -1.71
GPC1P35052 RN7SL817P-201ENST00000480777 288 ntBASIC4.38□□□□□ -1.71
GPC1P35052 RPS29P20-201ENST00000489592 171 ntBASIC4.38□□□□□ -1.71
GPC1P35052 RPS27AP10-201ENST00000496103 208 ntBASIC4.38□□□□□ -1.71
GPC1P35052 AC231760.1-201ENST00000498002 260 ntBASIC4.38□□□□□ -1.71
GPC1P35052 RNA5SP497-201ENST00000516081 97 ntBASIC4.38□□□□□ -1.71
GPC1P35052 RNU1-117P-201ENST00000517041 158 ntBASIC4.38□□□□□ -1.71
GPC1P35052 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.38□□□□□ -1.71
GPC1P35052 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.38□□□□□ -1.71
GPC1P35052 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.38□□□□□ -1.71
GPC1P35052 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.38□□□□□ -1.71
GPC1P35052 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GPC1P35052 SNX18P1Y-201ENST00000616231 511 ntBASIC4.38□□□□□ -1.71
GPC1P35052 AC087385.3-201ENST00000620477 187 ntBASIC4.38□□□□□ -1.71
GPC1P35052 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.38□□□□□ -1.71
GPC1P35052 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.38□□□□□ -1.71
GPC1P35052 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
GPC1P35052 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GPC1P35052 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
GPC1P35052 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GPC1P35052 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GPC1P35052 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC1P35052 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.37□□□□□ -1.71
GPC1P35052 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GPC1P35052 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC1P35052 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC1P35052 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.37□□□□□ -1.71
GPC1P35052 MIR367-201ENST00000362299 68 ntBASIC4.37□□□□□ -1.71
GPC1P35052 Y_RNA.229-201ENST00000364347 113 ntBASIC4.37□□□□□ -1.71
GPC1P35052 RNU6-755P-201ENST00000364400 103 ntBASIC4.37□□□□□ -1.71
GPC1P35052 PPIAP31-201ENST00000405422 495 ntBASIC4.37□□□□□ -1.71
GPC1P35052 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
GPC1P35052 AL049745.1-201ENST00000433953 286 ntBASIC4.37□□□□□ -1.71
GPC1P35052 NDUFB4P6-201ENST00000436819 366 ntBASIC4.37□□□□□ -1.71
GPC1P35052 AC016831.4-201ENST00000438302 307 ntBASIC4.37□□□□□ -1.71
GPC1P35052 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
GPC1P35052 RNU7-141P-201ENST00000459304 62 ntBASIC4.37□□□□□ -1.71
GPC1P35052 SCARNA22-201ENST00000503991 125 ntBASIC4.37□□□□□ -1.71
GPC1P35052 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.37□□□□□ -1.71
GPC1P35052 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.37□□□□□ -1.71
GPC1P35052 AC015912.2-201ENST00000571053 181 ntBASIC4.37□□□□□ -1.71
GPC1P35052 MTND6P33-201ENST00000571794 183 ntBASIC4.37□□□□□ -1.71
GPC1P35052 MIR3934-201ENST00000579806 107 ntBASIC4.37□□□□□ -1.71
GPC1P35052 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.37□□□□□ -1.71
GPC1P35052 AC023043.3-201ENST00000593113 385 ntBASIC4.37□□□□□ -1.71
GPC1P35052 AC091979.2-201ENST00000607514 214 ntBASIC4.37□□□□□ -1.71
GPC1P35052 Mico1.1-201ENST00000611698 204 ntBASIC4.37□□□□□ -1.71
GPC1P35052 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
GPC1P35052 SDAD1P1-202ENST00000524156 2051 ntBASIC4.37□□□□□ -1.71
GPC1P35052 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
GPC1P35052 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GPC1P35052 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.36□□□□□ -1.71
GPC1P35052 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
GPC1P35052 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GPC1P35052 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
GPC1P35052 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
GPC1P35052 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GPC1P35052 Y_RNA.393-201ENST00000383936 102 ntBASIC4.36□□□□□ -1.71
GPC1P35052 RNU6-147P-201ENST00000383983 107 ntBASIC4.36□□□□□ -1.71
GPC1P35052 RNU6-622P-201ENST00000384272 103 ntBASIC4.36□□□□□ -1.71
GPC1P35052 MIR585-201ENST00000384887 94 ntBASIC4.36□□□□□ -1.71
GPC1P35052 RNA5SP372-201ENST00000390836 115 ntBASIC4.36□□□□□ -1.71
GPC1P35052 RNU6-1228P-201ENST00000391014 107 ntBASIC4.36□□□□□ -1.71
GPC1P35052 CBX3P9-201ENST00000402326 552 ntBASIC4.36□□□□□ -1.71
GPC1P35052 Z74021.1-201ENST00000423610 407 ntBASIC4.36□□□□□ -1.71
GPC1P35052 AL714022.1-201ENST00000439897 151 ntBASIC4.36□□□□□ -1.71
GPC1P35052 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC1P35052 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC1P35052 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
GPC1P35052 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.36□□□□□ -1.71
GPC1P35052 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC1P35052 Y_RNA.712-201ENST00000517011 92 ntBASIC4.36□□□□□ -1.71
GPC1P35052 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.36□□□□□ -1.71
GPC1P35052 MIR4700-201ENST00000578311 74 ntBASIC4.36□□□□□ -1.71
GPC1P35052 MIR4724-201ENST00000579485 89 ntBASIC4.36□□□□□ -1.71
GPC1P35052 MIR3923-201ENST00000579521 83 ntBASIC4.36□□□□□ -1.71
GPC1P35052 MIR3136-201ENST00000583498 78 ntBASIC4.36□□□□□ -1.71
GPC1P35052 AC091178.1-203ENST00000584586 279 ntBASIC4.36□□□□□ -1.71
GPC1P35052 SNORD11B-201ENST00000607707 90 ntBASIC4.36□□□□□ -1.71
GPC1P35052 AC005520.5-201ENST00000613926 164 ntBASIC4.36□□□□□ -1.71
GPC1P35052 MIR6853-201ENST00000619642 74 ntBASIC4.36□□□□□ -1.71
GPC1P35052 AL773545.4-201ENST00000637262 310 ntBASIC4.36□□□□□ -1.71
GPC1P35052 AL513478.4-201ENST00000641636 310 ntBASIC4.36□□□□□ -1.71
GPC1P35052 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
GPC1P35052 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GPC1P35052 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
GPC1P35052 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
GPC1P35052 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.35□□□□□ -1.71
GPC1P35052 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.35□□□□□ -1.71
GPC1P35052 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GPC1P35052 Y_RNA.368-201ENST00000365547 113 ntBASIC4.35□□□□□ -1.71
GPC1P35052 MIR550A3-201ENST00000390735 95 ntBASIC4.35□□□□□ -1.71
GPC1P35052 MIR921-201ENST00000401133 56 ntBASIC4.35□□□□□ -1.71
GPC1P35052 HDGFP1-201ENST00000405943 252 ntBASIC4.35□□□□□ -1.71
GPC1P35052 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms