Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 ELOCP30-201ENST00000447108 299 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 PDCD5P2-201ENST00000507570 312 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 AC097473.1-201ENST00000508142 408 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.5□□□□□ -2.33
SDC4P31431 RNU6-583P-201ENST00000516012 92 ntBASIC0.5□□□□□ -2.33
SDC4P31431 SNORD60.2-201ENST00000516883 86 ntBASIC0.5□□□□□ -2.33
SDC4P31431 RNA5SP437-201ENST00000517249 129 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.5□□□□□ -2.33
SDC4P31431 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SDC4P31431 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SDC4P31431 AL133153.1-201ENST00000557756 303 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 MTCYBP33-201ENST00000575007 1130 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 AL512605.2-201ENST00000592972 256 ntBASIC0.5□□□□□ -2.33
SDC4P31431 BNIP3P8-201ENST00000597863 560 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AP000654.2-201ENST00000605633 586 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC063943.3-201ENST00000615562 356 ntBASIC0.5□□□□□ -2.33
SDC4P31431 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 AC068700.1-201ENST00000565862 3754 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC245060.5-201ENST00000610778 3293 ntBASIC0.49□□□□□ -2.33
SDC4P31431 OR4G2P-201ENST00000328113 903 ntBASIC0.49□□□□□ -2.33
SDC4P31431 snoU2_19.1-201ENST00000362361 80 ntBASIC0.49□□□□□ -2.33
SDC4P31431 RNU6-942P-201ENST00000363002 107 ntBASIC0.49□□□□□ -2.33
SDC4P31431 Y_RNA.332-201ENST00000365271 113 ntBASIC0.49□□□□□ -2.33
SDC4P31431 U6.112-201ENST00000384129 70 ntBASIC0.49□□□□□ -2.33
SDC4P31431 MIR605-201ENST00000385078 83 ntBASIC0.49□□□□□ -2.33
SDC4P31431 SNORD65.1-201ENST00000390889 71 ntBASIC0.49□□□□□ -2.33
SDC4P31431 Y_RNA.597-201ENST00000410463 100 ntBASIC0.49□□□□□ -2.33
SDC4P31431 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.49□□□□□ -2.33
SDC4P31431 AC114482.1-201ENST00000418010 247 ntBASIC0.49□□□□□ -2.33
SDC4P31431 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.49□□□□□ -2.33
SDC4P31431 AC003071.1-201ENST00000451219 789 ntBASIC0.49□□□□□ -2.33
SDC4P31431 RPL39P36-201ENST00000490784 156 ntBASIC0.49□□□□□ -2.33
SDC4P31431 RNU5A-4P-201ENST00000516588 111 ntBASIC0.49□□□□□ -2.33
SDC4P31431 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.49□□□□□ -2.33
SDC4P31431 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.49□□□□□ -2.33
SDC4P31431 BNIP3P16-201ENST00000589779 534 ntBASIC0.49□□□□□ -2.33
SDC4P31431 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.49□□□□□ -2.33
SDC4P31431 BNIP3P9-201ENST00000603714 553 ntBASIC0.49□□□□□ -2.33
SDC4P31431 AL365434.2-201ENST00000607979 234 ntBASIC0.49□□□□□ -2.33
SDC4P31431 AL365204.3-201ENST00000612448 685 ntBASIC0.49□□□□□ -2.33
SDC4P31431 RMST_4.1-201ENST00000616886 107 ntBASIC0.49□□□□□ -2.33
SDC4P31431 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
SDC4P31431 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SDC4P31431 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SDC4P31431 AL079343.1-201ENST00000572358 1771 ntBASIC0.48□□□□□ -2.33
SDC4P31431 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SDC4P31431 RNU6-1122P-201ENST00000384449 107 ntBASIC0.48□□□□□ -2.33
SDC4P31431 RNU6-1235P-201ENST00000384559 107 ntBASIC0.48□□□□□ -2.33
SDC4P31431 RNU2-7P-201ENST00000410794 178 ntBASIC0.48□□□□□ -2.33
SDC4P31431 RNA5SP247-201ENST00000411181 105 ntBASIC0.48□□□□□ -2.33
SDC4P31431 AC016831.2-201ENST00000417179 352 ntBASIC0.48□□□□□ -2.33
SDC4P31431 RPS26P5-201ENST00000418544 335 ntBASIC0.48□□□□□ -2.33
SDC4P31431 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.48□□□□□ -2.33
SDC4P31431 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.48□□□□□ -2.33
SDC4P31431 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
SDC4P31431 RPS15AP10-201ENST00000432472 382 ntBASIC0.48□□□□□ -2.33
SDC4P31431 RNU6-498P-201ENST00000459468 107 ntBASIC0.48□□□□□ -2.33
SDC4P31431 BET1P1-201ENST00000482276 359 ntBASIC0.48□□□□□ -2.33
SDC4P31431 AC026414.1-201ENST00000504046 698 ntBASIC0.48□□□□□ -2.33
SDC4P31431 HMGB1P28-201ENST00000507778 552 ntBASIC0.48□□□□□ -2.33
SDC4P31431 RNA5SP220-201ENST00000516298 104 ntBASIC0.48□□□□□ -2.33
SDC4P31431 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
SDC4P31431 SNORA70.22-201ENST00000517160 124 ntBASIC0.48□□□□□ -2.33
SDC4P31431 AC105129.3-201ENST00000605455 485 ntBASIC0.48□□□□□ -2.33
SDC4P31431 AC130324.3-201ENST00000614165 542 ntBASIC0.48□□□□□ -2.33
SDC4P31431 AC068647.2-201ENST00000637380 353 ntBASIC0.48□□□□□ -2.33
SDC4P31431 AC010615.1-201ENST00000594254 1764 ntBASIC0.47□□□□□ -2.33
SDC4P31431 AC083799.1-201ENST00000366451 910 ntBASIC0.47□□□□□ -2.33
SDC4P31431 RNU6-166P-201ENST00000384371 107 ntBASIC0.47□□□□□ -2.33
SDC4P31431 MIR301A-201ENST00000385261 86 ntBASIC0.47□□□□□ -2.33
SDC4P31431 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.47□□□□□ -2.33
SDC4P31431 AC010099.3-201ENST00000423896 409 ntBASIC0.47□□□□□ -2.33
SDC4P31431 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.47□□□□□ -2.33
SDC4P31431 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
SDC4P31431 MTND1P31-201ENST00000449206 961 ntBASIC0.47□□□□□ -2.33
SDC4P31431 HMGB1P30-201ENST00000492455 606 ntBASIC0.47□□□□□ -2.33
SDC4P31431 AC009646.1-201ENST00000510455 318 ntBASIC0.47□□□□□ -2.33
SDC4P31431 RNU6-1102P-201ENST00000516149 96 ntBASIC0.47□□□□□ -2.33
SDC4P31431 AC090142.3-201ENST00000519012 385 ntBASIC0.47□□□□□ -2.33
SDC4P31431 CR383656.8-201ENST00000549046 145 ntBASIC0.47□□□□□ -2.33
SDC4P31431 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.47□□□□□ -2.33
SDC4P31431 AC069114.2-201ENST00000604699 304 ntBASIC0.47□□□□□ -2.33
SDC4P31431 AC090578.1-201ENST00000604955 591 ntBASIC0.47□□□□□ -2.33
SDC4P31431 AL356094.1-201ENST00000624663 1212 ntBASIC0.47□□□□□ -2.33
SDC4P31431 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.47□□□□□ -2.33
SDC4P31431 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.47□□□□□ -2.33
SDC4P31431 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SDC4P31431 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
SDC4P31431 RNU6-792P-201ENST00000363490 107 ntBASIC0.46□□□□□ -2.34
SDC4P31431 RNU1-133P-201ENST00000364867 167 ntBASIC0.46□□□□□ -2.34
SDC4P31431 RNU6-331P-201ENST00000384724 107 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms