Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RNU7-94P-201ENST00000459576 63 ntBASIC6.18□□□□□ -1.42
HOXD11P31277 RNU6-1108P-201ENST00000516308 104 ntBASIC6.18□□□□□ -1.42
HOXD11P31277 PARP1P2-201ENST00000556806 195 ntBASIC6.18□□□□□ -1.42
HOXD11P31277 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXD11P31277 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD11P31277 AC008745.1-201ENST00000604064 271 ntBASIC6.18□□□□□ -1.42
HOXD11P31277 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXD11P31277 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD11P31277 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD11P31277 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
HOXD11P31277 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD11P31277 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD11P31277 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD11P31277 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD11P31277 AC104260.2-201ENST00000623551 3497 ntBASIC6.18□□□□□ -1.42
HOXD11P31277 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD11P31277 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD11P31277 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD11P31277 Y_RNA.494-201ENST00000384432 111 ntBASIC6.17□□□□□ -1.42
HOXD11P31277 Y_RNA.596-201ENST00000410462 109 ntBASIC6.17□□□□□ -1.42
HOXD11P31277 RPEP3-201ENST00000425462 676 ntBASIC6.17□□□□□ -1.42
HOXD11P31277 AC245884.2-201ENST00000426257 404 ntBASIC6.17□□□□□ -1.42
HOXD11P31277 RPS4XP23-201ENST00000487801 237 ntBASIC6.17□□□□□ -1.42
HOXD11P31277 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD11P31277 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD11P31277 RN7SL475P-201ENST00000583379 298 ntBASIC6.17□□□□□ -1.42
HOXD11P31277 AC034229.6-201ENST00000623704 224 ntBASIC6.17□□□□□ -1.42
HOXD11P31277 MIR6841-201ENST00000637129 72 ntBASIC6.17□□□□□ -1.42
HOXD11P31277 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD11P31277 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD11P31277 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD11P31277 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD11P31277 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD11P31277 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD11P31277 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
HOXD11P31277 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD11P31277 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD11P31277 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD11P31277 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD11P31277 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXD11P31277 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 RNA5SP305-201ENST00000362665 119 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 Y_RNA.173-201ENST00000363776 113 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 RN7SKP113-201ENST00000363891 295 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 MIR607-201ENST00000385241 96 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD11P31277 RN7SL459P-201ENST00000481078 302 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 RN7SL504P-201ENST00000494496 287 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 FGF7P7-201ENST00000514120 227 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 SCARNA13-201ENST00000516672 275 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 MTND5P40-201ENST00000559945 246 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 AC096996.1-201ENST00000563813 325 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 AC103810.1-201ENST00000579873 453 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 AC020891.4-201ENST00000605745 93 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 AC103810.6-201ENST00000606708 136 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 AL133481.2-203ENST00000607558 139 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
HOXD11P31277 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD11P31277 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD11P31277 AL731556.1-201ENST00000394628 3711 ntBASIC6.16□□□□□ -1.42
HOXD11P31277 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD11P31277 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
HOXD11P31277 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
HOXD11P31277 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD11P31277 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD11P31277 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HOXD11P31277 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXD11P31277 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HOXD11P31277 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HOXD11P31277 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
HOXD11P31277 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD11P31277 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD11P31277 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXD11P31277 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD11P31277 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXD11P31277 SNORA25.6-201ENST00000364121 118 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 RNA5SP138-201ENST00000365098 114 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXD11P31277 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD11P31277 RNU7-23P-201ENST00000459465 62 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 AC097484.1-201ENST00000471148 389 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 AC025554.1-201ENST00000505641 188 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 RNU6-965P-201ENST00000516721 96 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 RNU6-826P-201ENST00000516827 104 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 IGLV3-17-201ENST00000519099 244 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 AC012676.2-201ENST00000619258 186 ntBASIC6.15□□□□□ -1.42
HOXD11P31277 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD11P31277 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HOXD11P31277 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
HOXD11P31277 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HOXD11P31277 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXD11P31277 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms